Gene : Glyma.09G117900 G. max Wm82.a2.v1
Defline:  (1 of 45) PF03547 - Membrane transport protein (Mem_trans) Genomic Order:  1179
Name:  ? Glyma.09G117900 Secondary Identifier:  ? PAC:30483378
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G117900 0.5kb upstream 0.5kb upstream 6058 true Chr09: 27962577-27968634 Glycine max
Glyma.09G117900 0.5kb upstream 0.5kb upstream 500 false Chr09: 27962577-27963076 Glycine max
Glyma.09G117900 0.5kb downstream 0.5kb downstream 6058 true Chr09: 27963077-27969134 Glycine max
Glyma.09G117900 0.5kb downstream 0.5kb downstream 500 false Chr09: 27968635-27969134 Glycine max
Glyma.09G117900 1.0kb upstream 1.0kb upstream 6558 true Chr09: 27962077-27968634 Glycine max
Glyma.09G117900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27962077-27963076 Glycine max
Glyma.09G117900 1.0kb downstream 1.0kb downstream 6558 true Chr09: 27963077-27969634 Glycine max
Glyma.09G117900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27968635-27969634 Glycine max
Glyma.09G117900 2.0kb upstream 2.0kb upstream 7558 true Chr09: 27961077-27968634 Glycine max
Glyma.09G117900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27961077-27963076 Glycine max
Glyma.09G117900 2.0kb downstream 2.0kb downstream 7558 true Chr09: 27963077-27970634 Glycine max
Glyma.09G117900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27968635-27970634 Glycine max
Glyma.09G117900 5.0kb upstream 5.0kb upstream 10558 true Chr09: 27958077-27968634 Glycine max
Glyma.09G117900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27958077-27963076 Glycine max
Glyma.09G117900 5.0kb downstream 5.0kb downstream 10558 true Chr09: 27963077-27973634 Glycine max
Glyma.09G117900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27968635-27973634 Glycine max
Glyma.09G117900 10.0kb upstream 10.0kb upstream 15558 true Chr09: 27953077-27968634 Glycine max
Glyma.09G117900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27953077-27963076 Glycine max
Glyma.09G117900 10.0kb downstream 10.0kb downstream 15558 true Chr09: 27963077-27978634 Glycine max
Glyma.09G117900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27968635-27978634 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253851 5265 Fabidae View MSA
124067962 5270 Rosid View MSA
123747841 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.08785 0.0 3.65031    
cufflinks 2.09714 0.0 6.44131    
cufflinks 1.85856 0.0 5.82534    
cufflinks 4.43288 0.0 12.3803    
cufflinks 8.91215 0.0 23.8386   High
cufflinks 1.76115 0.0 5.52736    
cufflinks 0.0888035 0.0 0.347336 Low Low
cufflinks 6.15739 0.0 16.7507    
cufflinks 1.21054 0.0 4.00346    
cufflinks 5.618       High
cufflinks 1.311        
cufflinks 2.035        
cufflinks 1.713        
cufflinks 0.788        
cufflinks 3.471       High
cufflinks 1.99        
cufflinks 0.19       Low
cufflinks 3.21       High
cufflinks 1.481        
cufflinks 1.283        
cufflinks 0.586        
cufflinks 1.099        
cufflinks 0.583        
cufflinks 1.938        
cufflinks 1.789        
cufflinks 0.317       Low

0 Strain