Gene : Glyma.09G171000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR14927:SF0 - NUCLEOLAR PROTEIN 10 Genomic Order:  1710
Name:  ? Glyma.09G171000 Secondary Identifier:  ? PAC:30485477
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G171000 0.5kb upstream 0.5kb upstream 9351 true Chr09: 39588317-39597667 Glycine max
Glyma.09G171000 0.5kb upstream 0.5kb upstream 500 false Chr09: 39597168-39597667 Glycine max
Glyma.09G171000 0.5kb downstream 0.5kb downstream 9351 true Chr09: 39587817-39597167 Glycine max
Glyma.09G171000 0.5kb downstream 0.5kb downstream 500 false Chr09: 39587817-39588316 Glycine max
Glyma.09G171000 1.0kb upstream 1.0kb upstream 9851 true Chr09: 39588317-39598167 Glycine max
Glyma.09G171000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39597168-39598167 Glycine max
Glyma.09G171000 1.0kb downstream 1.0kb downstream 9851 true Chr09: 39587317-39597167 Glycine max
Glyma.09G171000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39587317-39588316 Glycine max
Glyma.09G171000 2.0kb upstream 2.0kb upstream 10851 true Chr09: 39588317-39599167 Glycine max
Glyma.09G171000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39597168-39599167 Glycine max
Glyma.09G171000 2.0kb downstream 2.0kb downstream 10851 true Chr09: 39586317-39597167 Glycine max
Glyma.09G171000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39586317-39588316 Glycine max
Glyma.09G171000 5.0kb upstream 5.0kb upstream 13851 true Chr09: 39588317-39602167 Glycine max
Glyma.09G171000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39597168-39602167 Glycine max
Glyma.09G171000 5.0kb downstream 5.0kb downstream 13851 true Chr09: 39583317-39597167 Glycine max
Glyma.09G171000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39583317-39588316 Glycine max
Glyma.09G171000 10.0kb upstream 10.0kb upstream 18851 true Chr09: 39588317-39607167 Glycine max
Glyma.09G171000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39597168-39607167 Glycine max
Glyma.09G171000 10.0kb downstream 10.0kb downstream 18851 true Chr09: 39578317-39597167 Glycine max
Glyma.09G171000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39578317-39588316 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303844 5265 Fabidae View MSA
124061255 5270 Rosid View MSA
123740786 5271 Pentapetalae View MSA
122786352 5272 Eudicot View MSA
122042207 5273 Angiosperm View MSA
121344508 5274 Embryophyte View MSA
123424204 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4055 0.0 38.9964    
cufflinks 6.55277 0.0 22.3188    
cufflinks 9.31477 0.0 28.3337    
cufflinks 6.38006 0.0 21.6914    
cufflinks 8.77468 0.0 29.3133    
cufflinks 3.92299 0.0 14.3424   Low
cufflinks 16.6482 0.0 58.1786   High
cufflinks 4.97931 0.0 17.5357    
cufflinks 6.61871 0.0 22.3772    
cufflinks 0.634       Low
cufflinks 0.635       Low
cufflinks 1.827       High
cufflinks 1.284        
cufflinks 1.907       High
cufflinks 0.966        
cufflinks 0.822        
cufflinks 1.004        
cufflinks 1.059        
cufflinks 1.348       High
cufflinks 0.632       Low
cufflinks 0.74        
cufflinks 0.733        
cufflinks 0.733        
cufflinks 0.728        
cufflinks 0.847        
cufflinks 0.806        

0 Strain