Gene : Glyma.09G171100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31496:SF7 - TRANSCRIPTION REPRESSOR KAN1-RELATED Genomic Order:  1711
Name:  ? Glyma.09G171100 Secondary Identifier:  ? PAC:30484566
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G171100 0.5kb upstream 0.5kb upstream 10984 true Chr09: 39607186-39618169 Glycine max
Glyma.09G171100 0.5kb upstream 0.5kb upstream 500 false Chr09: 39607186-39607685 Glycine max
Glyma.09G171100 0.5kb downstream 0.5kb downstream 10984 true Chr09: 39607686-39618669 Glycine max
Glyma.09G171100 0.5kb downstream 0.5kb downstream 500 false Chr09: 39618170-39618669 Glycine max
Glyma.09G171100 1.0kb upstream 1.0kb upstream 11484 true Chr09: 39606686-39618169 Glycine max
Glyma.09G171100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39606686-39607685 Glycine max
Glyma.09G171100 1.0kb downstream 1.0kb downstream 11484 true Chr09: 39607686-39619169 Glycine max
Glyma.09G171100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39618170-39619169 Glycine max
Glyma.09G171100 2.0kb upstream 2.0kb upstream 12484 true Chr09: 39605686-39618169 Glycine max
Glyma.09G171100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39605686-39607685 Glycine max
Glyma.09G171100 2.0kb downstream 2.0kb downstream 12484 true Chr09: 39607686-39620169 Glycine max
Glyma.09G171100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39618170-39620169 Glycine max
Glyma.09G171100 5.0kb upstream 5.0kb upstream 15484 true Chr09: 39602686-39618169 Glycine max
Glyma.09G171100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39602686-39607685 Glycine max
Glyma.09G171100 5.0kb downstream 5.0kb downstream 15484 true Chr09: 39607686-39623169 Glycine max
Glyma.09G171100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39618170-39623169 Glycine max
Glyma.09G171100 10.0kb upstream 10.0kb upstream 20484 true Chr09: 39597686-39618169 Glycine max
Glyma.09G171100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39597686-39607685 Glycine max
Glyma.09G171100 10.0kb downstream 10.0kb downstream 20484 true Chr09: 39607686-39628169 Glycine max
Glyma.09G171100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39618170-39628169 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312108 5265 Fabidae View MSA
124062030 5270 Rosid View MSA
123747856 5271 Pentapetalae View MSA
122786370 5272 Eudicot View MSA
122051060 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349698 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.245938 0.0 1.17498   Low
cufflinks 4.32399 0.0 18.0888    
cufflinks 6.51873 0.0 23.9729    
cufflinks 1.35593 0.0 7.40903    
cufflinks 2.13387 0.0 9.55719    
cufflinks 4.75591 0.0 19.4126    
cufflinks 4.62023 0.0 19.1163    
cufflinks 3.981 0.0 14.3853    
cufflinks 2.57935 0.0 10.7013    
cufflinks 0.359        
cufflinks 0.261        
cufflinks 0.668       High
cufflinks 0.264        
cufflinks 0.183        
cufflinks 0.22        
cufflinks 0.083     Low Low
cufflinks 1.076       High
cufflinks 0.583        
cufflinks 0.606        
cufflinks 0.08     Low Low
cufflinks 0.365        
cufflinks 0.072     Low Low
cufflinks 0.05     Low Low
cufflinks 0.398        
cufflinks 0.096     Low Low
cufflinks 0.486        

0 Strain