Gene : Glyma.09G171500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15184:SF42 - ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC Genomic Order:  1715
Name:  ? Glyma.09G171500 Secondary Identifier:  ? PAC:30486181
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6126 Glycine max pathologic  
Gmax PWY-7219 Glycine max pathologic  
Gmax PWY-7229 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G171500 0.5kb upstream 0.5kb upstream 857 true Chr09: 39630511-39631367 Glycine max
Glyma.09G171500 0.5kb upstream 0.5kb upstream 500 false Chr09: 39630868-39631367 Glycine max
Glyma.09G171500 0.5kb downstream 0.5kb downstream 857 true Chr09: 39630011-39630867 Glycine max
Glyma.09G171500 0.5kb downstream 0.5kb downstream 500 false Chr09: 39630011-39630510 Glycine max
Glyma.09G171500 1.0kb upstream 1.0kb upstream 1357 true Chr09: 39630511-39631867 Glycine max
Glyma.09G171500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39630868-39631867 Glycine max
Glyma.09G171500 1.0kb downstream 1.0kb downstream 1357 true Chr09: 39629511-39630867 Glycine max
Glyma.09G171500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39629511-39630510 Glycine max
Glyma.09G171500 2.0kb upstream 2.0kb upstream 2357 true Chr09: 39630511-39632867 Glycine max
Glyma.09G171500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39630868-39632867 Glycine max
Glyma.09G171500 2.0kb downstream 2.0kb downstream 2357 true Chr09: 39628511-39630867 Glycine max
Glyma.09G171500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39628511-39630510 Glycine max
Glyma.09G171500 5.0kb upstream 5.0kb upstream 5357 true Chr09: 39630511-39635867 Glycine max
Glyma.09G171500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39630868-39635867 Glycine max
Glyma.09G171500 5.0kb downstream 5.0kb downstream 5357 true Chr09: 39625511-39630867 Glycine max
Glyma.09G171500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39625511-39630510 Glycine max
Glyma.09G171500 10.0kb upstream 10.0kb upstream 10357 true Chr09: 39630511-39640867 Glycine max
Glyma.09G171500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39630868-39640867 Glycine max
Glyma.09G171500 10.0kb downstream 10.0kb downstream 10357 true Chr09: 39620511-39630867 Glycine max
Glyma.09G171500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39620511-39630510 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298551 5265 Fabidae View MSA
124040369 5270 Rosid View MSA
123753752 5271 Pentapetalae View MSA
122797462 5272 Eudicot View MSA
122051574 5273 Angiosperm View MSA
123429126 5275 Viridiplantae View MSA
121351571 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.52429 0.0 2.13717    
cufflinks 0.0769396 0.0 0.367317 Low  
cufflinks 0.00989942 0.0 0.0775773 Low Low
cufflinks 0.922912 0.0 3.66775   High
cufflinks 0.108304 0.0 0.496216 Low  
cufflinks 0.0650709 0.0 0.315769 Low  
cufflinks 0.378423 0.0 1.56926    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0217894 0.0 0.123444 Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.079     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  

0 Strain