Gene : Glyma.09G172000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10218:SF192 - EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3 Genomic Order:  1720
Name:  ? Glyma.09G172000 Secondary Identifier:  ? PAC:30482905
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G172000 0.5kb upstream 0.5kb upstream 9787 true Chr09: 39664172-39673958 Glycine max
Glyma.09G172000 0.5kb upstream 0.5kb upstream 500 false Chr09: 39664172-39664671 Glycine max
Glyma.09G172000 0.5kb downstream 0.5kb downstream 9787 true Chr09: 39664672-39674458 Glycine max
Glyma.09G172000 0.5kb downstream 0.5kb downstream 500 false Chr09: 39673959-39674458 Glycine max
Glyma.09G172000 1.0kb upstream 1.0kb upstream 10287 true Chr09: 39663672-39673958 Glycine max
Glyma.09G172000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39663672-39664671 Glycine max
Glyma.09G172000 1.0kb downstream 1.0kb downstream 10287 true Chr09: 39664672-39674958 Glycine max
Glyma.09G172000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39673959-39674958 Glycine max
Glyma.09G172000 2.0kb upstream 2.0kb upstream 11287 true Chr09: 39662672-39673958 Glycine max
Glyma.09G172000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39662672-39664671 Glycine max
Glyma.09G172000 2.0kb downstream 2.0kb downstream 11287 true Chr09: 39664672-39675958 Glycine max
Glyma.09G172000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39673959-39675958 Glycine max
Glyma.09G172000 5.0kb upstream 5.0kb upstream 14287 true Chr09: 39659672-39673958 Glycine max
Glyma.09G172000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39659672-39664671 Glycine max
Glyma.09G172000 5.0kb downstream 5.0kb downstream 14287 true Chr09: 39664672-39678958 Glycine max
Glyma.09G172000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39673959-39678958 Glycine max
Glyma.09G172000 10.0kb upstream 10.0kb upstream 19287 true Chr09: 39654672-39673958 Glycine max
Glyma.09G172000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39654672-39664671 Glycine max
Glyma.09G172000 10.0kb downstream 10.0kb downstream 19287 true Chr09: 39664672-39683958 Glycine max
Glyma.09G172000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39673959-39683958 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299635 5265 Fabidae View MSA
124071041 5270 Rosid View MSA
123753247 5271 Pentapetalae View MSA
122788427 5272 Eudicot View MSA
122051090 5273 Angiosperm View MSA
121350820 5274 Embryophyte View MSA
123381896 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.67963 0.0 20.5108    
cufflinks 5.64042 0.0 15.2268    
cufflinks 4.77872 0.0 13.0216   Low
cufflinks 6.8476 0.0 18.3443    
cufflinks 5.6467 0.0 15.2148    
cufflinks 9.59229 0.0 25.598   High
cufflinks 4.65298 0.0 12.6922   Low
cufflinks 6.08686 0.0 16.3747    
cufflinks 6.83007 0.0 18.2916    
cufflinks 2.566       Low
cufflinks 3.542        
cufflinks 2.275       Low
cufflinks 2.894        
cufflinks 2.334       Low
cufflinks 2.897        
cufflinks 3.061        
cufflinks 4.075       High
cufflinks 2.902        
cufflinks 3.035        
cufflinks 3.223        
cufflinks 3.825       High
cufflinks 3.185        
cufflinks 2.769        
cufflinks 4.089       High
cufflinks 3.049        
cufflinks 3.733       High

0 Strain