Gene : Glyma.09G177200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32295:SF12 - PROTEIN IQ-DOMAIN 15-RELATED Genomic Order:  1772
Name:  ? Glyma.09G177200 Secondary Identifier:  ? PAC:30483542
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G177200 0.5kb upstream 0.5kb upstream 5465 true Chr09: 40149013-40154477 Glycine max
Glyma.09G177200 0.5kb upstream 0.5kb upstream 500 false Chr09: 40153978-40154477 Glycine max
Glyma.09G177200 0.5kb downstream 0.5kb downstream 5465 true Chr09: 40148513-40153977 Glycine max
Glyma.09G177200 0.5kb downstream 0.5kb downstream 500 false Chr09: 40148513-40149012 Glycine max
Glyma.09G177200 1.0kb upstream 1.0kb upstream 5965 true Chr09: 40149013-40154977 Glycine max
Glyma.09G177200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 40153978-40154977 Glycine max
Glyma.09G177200 1.0kb downstream 1.0kb downstream 5965 true Chr09: 40148013-40153977 Glycine max
Glyma.09G177200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 40148013-40149012 Glycine max
Glyma.09G177200 2.0kb upstream 2.0kb upstream 6965 true Chr09: 40149013-40155977 Glycine max
Glyma.09G177200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 40153978-40155977 Glycine max
Glyma.09G177200 2.0kb downstream 2.0kb downstream 6965 true Chr09: 40147013-40153977 Glycine max
Glyma.09G177200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 40147013-40149012 Glycine max
Glyma.09G177200 5.0kb upstream 5.0kb upstream 9965 true Chr09: 40149013-40158977 Glycine max
Glyma.09G177200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 40153978-40158977 Glycine max
Glyma.09G177200 5.0kb downstream 5.0kb downstream 9965 true Chr09: 40144013-40153977 Glycine max
Glyma.09G177200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 40144013-40149012 Glycine max
Glyma.09G177200 10.0kb upstream 10.0kb upstream 14965 true Chr09: 40149013-40163977 Glycine max
Glyma.09G177200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 40153978-40163977 Glycine max
Glyma.09G177200 10.0kb downstream 10.0kb downstream 14965 true Chr09: 40139013-40153977 Glycine max
Glyma.09G177200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 40139013-40149012 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306492 5265 Fabidae View MSA
124066612 5270 Rosid View MSA
123736615 5271 Pentapetalae View MSA
122788189 5272 Eudicot View MSA
122046736 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.17256 0.0 7.55261   Low
cufflinks 4.40873 0.0 19.3176    
cufflinks 2.53307 0.0 14.2997   Low
cufflinks 5.53856 0.0 26.306   High
cufflinks 2.93963 0.0 15.3413    
cufflinks 3.50494 0.0 13.9871    
cufflinks 4.07503 0.0 15.2789    
cufflinks 4.5384 0.0 19.2103    
cufflinks 5.23636 0.0 24.4932   High
cufflinks 0.289        
cufflinks 0.097       Low
cufflinks 0.425        
cufflinks 0.329        
cufflinks 0.141        
cufflinks 0.258        
cufflinks 0.384        
cufflinks 0.172        
cufflinks 0.492       High
cufflinks 0.488       High
cufflinks 0.402        
cufflinks 0.105       Low
cufflinks 0.35        
cufflinks 0.287        
cufflinks 0.067       Low
cufflinks 0.436        
cufflinks 0.26        

0 Strain