Gene : Glyma.09G177500 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG4012 - Histone H1 Genomic Order:  1775
Name:  ? Glyma.09G177500 Secondary Identifier:  ? PAC:30483781
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G177500 0.5kb upstream 0.5kb upstream 6318 true Chr09: 40195951-40202268 Glycine max
Glyma.09G177500 0.5kb upstream 0.5kb upstream 500 false Chr09: 40195951-40196450 Glycine max
Glyma.09G177500 0.5kb downstream 0.5kb downstream 6318 true Chr09: 40196451-40202768 Glycine max
Glyma.09G177500 0.5kb downstream 0.5kb downstream 500 false Chr09: 40202269-40202768 Glycine max
Glyma.09G177500 1.0kb upstream 1.0kb upstream 6818 true Chr09: 40195451-40202268 Glycine max
Glyma.09G177500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 40195451-40196450 Glycine max
Glyma.09G177500 1.0kb downstream 1.0kb downstream 6818 true Chr09: 40196451-40203268 Glycine max
Glyma.09G177500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 40202269-40203268 Glycine max
Glyma.09G177500 2.0kb upstream 2.0kb upstream 7818 true Chr09: 40194451-40202268 Glycine max
Glyma.09G177500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 40194451-40196450 Glycine max
Glyma.09G177500 2.0kb downstream 2.0kb downstream 7818 true Chr09: 40196451-40204268 Glycine max
Glyma.09G177500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 40202269-40204268 Glycine max
Glyma.09G177500 5.0kb upstream 5.0kb upstream 10818 true Chr09: 40191451-40202268 Glycine max
Glyma.09G177500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 40191451-40196450 Glycine max
Glyma.09G177500 5.0kb downstream 5.0kb downstream 10818 true Chr09: 40196451-40207268 Glycine max
Glyma.09G177500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 40202269-40207268 Glycine max
Glyma.09G177500 10.0kb upstream 10.0kb upstream 15818 true Chr09: 40186451-40202268 Glycine max
Glyma.09G177500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 40186451-40196450 Glycine max
Glyma.09G177500 10.0kb downstream 10.0kb downstream 15818 true Chr09: 40196451-40212268 Glycine max
Glyma.09G177500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 40202269-40212268 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029847 5273 Angiosperm View MSA
122311965 5265 Fabidae View MSA
124072577 5270 Rosid View MSA
123747528 5271 Pentapetalae View MSA
122795088 5272 Eudicot View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5787 0.0 31.1293    
cufflinks 14.2682 0.0 38.1805   High
cufflinks 6.89393 0.0 19.3541   Low
cufflinks 10.6281 0.0 28.7268    
cufflinks 12.8007 0.0 34.2404    
cufflinks 5.61228 0.0 15.928   Low
cufflinks 10.6642 0.0 28.7291    
cufflinks 7.74918 0.0 21.3651    
cufflinks 12.09 0.0 32.457    
cufflinks 2.661        
cufflinks 2.796        
cufflinks 3.102        
cufflinks 4.33        
cufflinks 4.634        
cufflinks 2.673        
cufflinks 6.062       High
cufflinks 1.332       Low
cufflinks 3.41        
cufflinks 6.35       High
cufflinks 5.175        
cufflinks 3.667        
cufflinks 5.165        
cufflinks 6.344       High
cufflinks 3.015        
cufflinks 4.969        
cufflinks 2.777        

0 Strain