Gene : Glyma.09G165300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11527:SF171 - ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN Genomic Order:  1653
Name:  ? Glyma.09G165300 Secondary Identifier:  ? PAC:30486422
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G165300 0.5kb upstream 0.5kb upstream 1789 true Chr09: 38939159-38940947 Glycine max
Glyma.09G165300 0.5kb upstream 0.5kb upstream 500 false Chr09: 38939159-38939658 Glycine max
Glyma.09G165300 0.5kb downstream 0.5kb downstream 1789 true Chr09: 38939659-38941447 Glycine max
Glyma.09G165300 0.5kb downstream 0.5kb downstream 500 false Chr09: 38940948-38941447 Glycine max
Glyma.09G165300 1.0kb upstream 1.0kb upstream 2289 true Chr09: 38938659-38940947 Glycine max
Glyma.09G165300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38938659-38939658 Glycine max
Glyma.09G165300 1.0kb downstream 1.0kb downstream 2289 true Chr09: 38939659-38941947 Glycine max
Glyma.09G165300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38940948-38941947 Glycine max
Glyma.09G165300 2.0kb upstream 2.0kb upstream 3289 true Chr09: 38937659-38940947 Glycine max
Glyma.09G165300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38937659-38939658 Glycine max
Glyma.09G165300 2.0kb downstream 2.0kb downstream 3289 true Chr09: 38939659-38942947 Glycine max
Glyma.09G165300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38940948-38942947 Glycine max
Glyma.09G165300 5.0kb upstream 5.0kb upstream 6289 true Chr09: 38934659-38940947 Glycine max
Glyma.09G165300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38934659-38939658 Glycine max
Glyma.09G165300 5.0kb downstream 5.0kb downstream 6289 true Chr09: 38939659-38945947 Glycine max
Glyma.09G165300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38940948-38945947 Glycine max
Glyma.09G165300 10.0kb upstream 10.0kb upstream 11289 true Chr09: 38929659-38940947 Glycine max
Glyma.09G165300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38929659-38939658 Glycine max
Glyma.09G165300 10.0kb downstream 10.0kb downstream 11289 true Chr09: 38939659-38950947 Glycine max
Glyma.09G165300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38940948-38950947 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312216 5265 Fabidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.22923 0.0 4.58364   Low
cufflinks 3.08009 0.0 10.8401    
cufflinks 4.59386 0.0 15.4706    
cufflinks 6.07683 0.0 19.8091    
cufflinks 2.53505 0.0 9.0542    
cufflinks 1.72583 0.0 6.31793    
cufflinks 0.688873 0.0 2.63508   Low
cufflinks 12.5954 0.0 37.1702   High
cufflinks 4.89303 0.0 16.45    
cufflinks 16.395     High High
cufflinks 5.465        
cufflinks 2.772        
cufflinks 4.57        
cufflinks 1.316        
cufflinks 0.164       Low
cufflinks 3.742        
cufflinks 3.865        
cufflinks 7.51     High  
cufflinks 1.03       Low
cufflinks 4.043        
cufflinks 6.632     High  
cufflinks 4.449        
cufflinks 1.927        
cufflinks 2.19        
cufflinks 4.489        
cufflinks 4.587        

0 Strain