Gene : Glyma.09G165600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21681 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 1 Genomic Order:  1656
Name:  ? Glyma.09G165600 Secondary Identifier:  ? PAC:30483546
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G165600 0.5kb upstream 0.5kb upstream 5252 true Chr09: 38949944-38955195 Glycine max
Glyma.09G165600 0.5kb upstream 0.5kb upstream 500 false Chr09: 38949944-38950443 Glycine max
Glyma.09G165600 0.5kb downstream 0.5kb downstream 5252 true Chr09: 38950444-38955695 Glycine max
Glyma.09G165600 0.5kb downstream 0.5kb downstream 500 false Chr09: 38955196-38955695 Glycine max
Glyma.09G165600 1.0kb upstream 1.0kb upstream 5752 true Chr09: 38949444-38955195 Glycine max
Glyma.09G165600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38949444-38950443 Glycine max
Glyma.09G165600 1.0kb downstream 1.0kb downstream 5752 true Chr09: 38950444-38956195 Glycine max
Glyma.09G165600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38955196-38956195 Glycine max
Glyma.09G165600 2.0kb upstream 2.0kb upstream 6752 true Chr09: 38948444-38955195 Glycine max
Glyma.09G165600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38948444-38950443 Glycine max
Glyma.09G165600 2.0kb downstream 2.0kb downstream 6752 true Chr09: 38950444-38957195 Glycine max
Glyma.09G165600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38955196-38957195 Glycine max
Glyma.09G165600 5.0kb upstream 5.0kb upstream 9752 true Chr09: 38945444-38955195 Glycine max
Glyma.09G165600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38945444-38950443 Glycine max
Glyma.09G165600 5.0kb downstream 5.0kb downstream 9752 true Chr09: 38950444-38960195 Glycine max
Glyma.09G165600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38955196-38960195 Glycine max
Glyma.09G165600 10.0kb upstream 10.0kb upstream 14752 true Chr09: 38940444-38955195 Glycine max
Glyma.09G165600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38940444-38950443 Glycine max
Glyma.09G165600 10.0kb downstream 10.0kb downstream 14752 true Chr09: 38950444-38965195 Glycine max
Glyma.09G165600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38955196-38965195 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305517 5265 Fabidae View MSA
124062872 5270 Rosid View MSA
123745342 5271 Pentapetalae View MSA
122795526 5272 Eudicot View MSA
122043857 5273 Angiosperm View MSA
121344885 5274 Embryophyte View MSA
123424883 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.4442 0.0 59.9295 High  
cufflinks 19.4254 0.0 51.9897   Low
cufflinks 22.454 0.0 59.9261 High  
cufflinks 22.1289 0.0 59.0714 High  
cufflinks 34.837 0.0 93.4131 High High
cufflinks 37.5779 0.0 101.072 High High
cufflinks 23.5816 0.0 62.9429 High  
cufflinks 27.7017 0.0 73.9593 High  
cufflinks 24.4765 0.0 65.302 High  
cufflinks 8.22     High  
cufflinks 5.855     High  
cufflinks 6.387        
cufflinks 12.025     High High
cufflinks 14.282     High High
cufflinks 4.775       Low
cufflinks 4.904        
cufflinks 7.935     High  
cufflinks 6.279        
cufflinks 6.419        
cufflinks 4.837       Low
cufflinks 6.609     High  
cufflinks 5.051        
cufflinks 7.167        
cufflinks 6.169     High  
cufflinks 4.727       Low
cufflinks 7.477     High  

0 Strain