Gene : Glyma.09G166400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24064:SF271 - ORGANIC CATION/CARNITINE TRANSPORTER 1 Genomic Order:  1664
Name:  ? Glyma.09G166400 Secondary Identifier:  ? PAC:30486466
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G166400 0.5kb upstream 0.5kb upstream 5736 true Chr09: 39034658-39040393 Glycine max
Glyma.09G166400 0.5kb upstream 0.5kb upstream 500 false Chr09: 39039894-39040393 Glycine max
Glyma.09G166400 0.5kb downstream 0.5kb downstream 5736 true Chr09: 39034158-39039893 Glycine max
Glyma.09G166400 0.5kb downstream 0.5kb downstream 500 false Chr09: 39034158-39034657 Glycine max
Glyma.09G166400 1.0kb upstream 1.0kb upstream 6236 true Chr09: 39034658-39040893 Glycine max
Glyma.09G166400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39039894-39040893 Glycine max
Glyma.09G166400 1.0kb downstream 1.0kb downstream 6236 true Chr09: 39033658-39039893 Glycine max
Glyma.09G166400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39033658-39034657 Glycine max
Glyma.09G166400 2.0kb upstream 2.0kb upstream 7236 true Chr09: 39034658-39041893 Glycine max
Glyma.09G166400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39039894-39041893 Glycine max
Glyma.09G166400 2.0kb downstream 2.0kb downstream 7236 true Chr09: 39032658-39039893 Glycine max
Glyma.09G166400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39032658-39034657 Glycine max
Glyma.09G166400 5.0kb upstream 5.0kb upstream 10236 true Chr09: 39034658-39044893 Glycine max
Glyma.09G166400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39039894-39044893 Glycine max
Glyma.09G166400 5.0kb downstream 5.0kb downstream 10236 true Chr09: 39029658-39039893 Glycine max
Glyma.09G166400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39029658-39034657 Glycine max
Glyma.09G166400 10.0kb upstream 10.0kb upstream 15236 true Chr09: 39034658-39049893 Glycine max
Glyma.09G166400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39039894-39049893 Glycine max
Glyma.09G166400 10.0kb downstream 10.0kb downstream 15236 true Chr09: 39024658-39039893 Glycine max
Glyma.09G166400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39024658-39034657 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316506 5265 Fabidae View MSA
124060950 5270 Rosid View MSA
123752944 5271 Pentapetalae View MSA
122793409 5272 Eudicot View MSA
122049028 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121351070 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.139859 0.0 0.545916 Low  
cufflinks 0.190525 0.0 0.733757 Low  
cufflinks 1.41572 0.0 4.80441    
cufflinks 6.8863 0.0 19.1069   High
cufflinks 1.14443 0.0 3.98512    
cufflinks 0.085398 0.0 0.33916 Low  
cufflinks 14.0928 0.0 37.6672   High
cufflinks 0.0338817 0.0 0.140228 Low Low
cufflinks 1.533 0.0 5.16671    
cufflinks 0.009     Low  
cufflinks 0.018     Low  
cufflinks 1.095       High
cufflinks 0.07     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.13        
cufflinks 0.032     Low  
cufflinks 0.13        
cufflinks 5.835       High
cufflinks 0.013     Low  
cufflinks 0.003     Low Low
cufflinks 0.062     Low  
cufflinks 0.018     Low  
cufflinks 0.007     Low  
cufflinks 0.082        
cufflinks 0.011     Low  
cufflinks 0.068        

0 Strain