Gene : Glyma.09G166500 G. max Wm82.a2.v1
Defline:  (1 of 4) PF14770 - Transmembrane protein 18 (TMEM18) Genomic Order:  1665
Name:  ? Glyma.09G166500 Secondary Identifier:  ? PAC:30484431
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G166500 0.5kb upstream 0.5kb upstream 3773 true Chr09: 39050470-39054242 Glycine max
Glyma.09G166500 0.5kb upstream 0.5kb upstream 500 false Chr09: 39053743-39054242 Glycine max
Glyma.09G166500 0.5kb downstream 0.5kb downstream 3773 true Chr09: 39049970-39053742 Glycine max
Glyma.09G166500 0.5kb downstream 0.5kb downstream 500 false Chr09: 39049970-39050469 Glycine max
Glyma.09G166500 1.0kb upstream 1.0kb upstream 4273 true Chr09: 39050470-39054742 Glycine max
Glyma.09G166500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39053743-39054742 Glycine max
Glyma.09G166500 1.0kb downstream 1.0kb downstream 4273 true Chr09: 39049470-39053742 Glycine max
Glyma.09G166500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39049470-39050469 Glycine max
Glyma.09G166500 2.0kb upstream 2.0kb upstream 5273 true Chr09: 39050470-39055742 Glycine max
Glyma.09G166500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39053743-39055742 Glycine max
Glyma.09G166500 2.0kb downstream 2.0kb downstream 5273 true Chr09: 39048470-39053742 Glycine max
Glyma.09G166500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39048470-39050469 Glycine max
Glyma.09G166500 5.0kb upstream 5.0kb upstream 8273 true Chr09: 39050470-39058742 Glycine max
Glyma.09G166500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39053743-39058742 Glycine max
Glyma.09G166500 5.0kb downstream 5.0kb downstream 8273 true Chr09: 39045470-39053742 Glycine max
Glyma.09G166500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39045470-39050469 Glycine max
Glyma.09G166500 10.0kb upstream 10.0kb upstream 13273 true Chr09: 39050470-39063742 Glycine max
Glyma.09G166500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39053743-39063742 Glycine max
Glyma.09G166500 10.0kb downstream 10.0kb downstream 13273 true Chr09: 39040470-39053742 Glycine max
Glyma.09G166500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39040470-39050469 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305051 5265 Fabidae View MSA
124064626 5270 Rosid View MSA
123738395 5271 Pentapetalae View MSA
122787911 5272 Eudicot View MSA
122046427 5273 Angiosperm View MSA
121346161 5274 Embryophyte View MSA
123424935 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.5208 0.0 42.9813    
cufflinks 6.2201 0.0 34.924    
cufflinks 5.66254 0.0 35.864   Low
cufflinks 7.16201 0.0 38.0304    
cufflinks 8.43009 0.0 42.0749    
cufflinks 6.85576 0.0 27.2779    
cufflinks 12.417 0.0 66.3015   High
cufflinks 8.66068 0.0 43.1532    
cufflinks 8.53651 0.0 42.166    
cufflinks 0.499        
cufflinks 0.254       Low
cufflinks 0.418        
cufflinks 0.548       High
cufflinks 0.609       High
cufflinks 0.386        
cufflinks 0.373        
cufflinks 0.337        
cufflinks 0.485        
cufflinks 0.466        
cufflinks 0.402        
cufflinks 0.262       Low
cufflinks 0.418        
cufflinks 0.479        
cufflinks 0.3       Low
cufflinks 0.349        
cufflinks 0.321        

0 Strain