Gene : Glyma.09G168900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11999:SF113 - GLUTAMATE DECARBOXYLASE 2 Genomic Order:  1689
Name:  ? Glyma.09G168900 Secondary Identifier:  ? PAC:30482692
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUDEG-I-PWY Glycine max pathologic  
Gmax PWY0-1305 Glycine max pathologic  
Gmax PWY-4321 Glycine max pathologic  

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G168900 0.5kb upstream 0.5kb upstream 5157 true Chr09: 39358663-39363819 Glycine max
Glyma.09G168900 0.5kb upstream 0.5kb upstream 500 false Chr09: 39358663-39359162 Glycine max
Glyma.09G168900 0.5kb downstream 0.5kb downstream 5157 true Chr09: 39359163-39364319 Glycine max
Glyma.09G168900 0.5kb downstream 0.5kb downstream 500 false Chr09: 39363820-39364319 Glycine max
Glyma.09G168900 1.0kb upstream 1.0kb upstream 5657 true Chr09: 39358163-39363819 Glycine max
Glyma.09G168900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39358163-39359162 Glycine max
Glyma.09G168900 1.0kb downstream 1.0kb downstream 5657 true Chr09: 39359163-39364819 Glycine max
Glyma.09G168900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39363820-39364819 Glycine max
Glyma.09G168900 2.0kb upstream 2.0kb upstream 6657 true Chr09: 39357163-39363819 Glycine max
Glyma.09G168900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39357163-39359162 Glycine max
Glyma.09G168900 2.0kb downstream 2.0kb downstream 6657 true Chr09: 39359163-39365819 Glycine max
Glyma.09G168900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39363820-39365819 Glycine max
Glyma.09G168900 5.0kb upstream 5.0kb upstream 9657 true Chr09: 39354163-39363819 Glycine max
Glyma.09G168900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39354163-39359162 Glycine max
Glyma.09G168900 5.0kb downstream 5.0kb downstream 9657 true Chr09: 39359163-39368819 Glycine max
Glyma.09G168900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39363820-39368819 Glycine max
Glyma.09G168900 10.0kb upstream 10.0kb upstream 14657 true Chr09: 39349163-39363819 Glycine max
Glyma.09G168900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39349163-39359162 Glycine max
Glyma.09G168900 10.0kb downstream 10.0kb downstream 14657 true Chr09: 39359163-39373819 Glycine max
Glyma.09G168900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39363820-39373819 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304634 5265 Fabidae View MSA
124069705 5270 Rosid View MSA
123740239 5271 Pentapetalae View MSA
122794594 5272 Eudicot View MSA
122050334 5273 Angiosperm View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.61777 0.0 8.09412    
cufflinks 7.82646 0.0 21.3489    
cufflinks 12.6376 0.0 33.7564    
cufflinks 80.6952 0.0 250.958 High High
cufflinks 6.16314 0.0 17.1366    
cufflinks 0.795414 0.0 2.82559   Low
cufflinks 63.5424 0.0 189.305 High High
cufflinks 24.3534 0.0 65.7708 High  
cufflinks 8.24308 0.0 22.3995    
cufflinks 8.616     High High
cufflinks 1.737        
cufflinks 6.055       High
cufflinks 0.82        
cufflinks 0.09       Low
cufflinks 0.815        
cufflinks 1.839        
cufflinks 4.284        
cufflinks 8.044     High High
cufflinks 1.766        
cufflinks 2.089        
cufflinks 1.786        
cufflinks 2.056        
cufflinks 1.961        
cufflinks 1.759        
cufflinks 1.948        
cufflinks 1.022        

0 Strain