Gene : Glyma.09G170300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31421:SF0 - PROTEIN BASIC PENTACYSTEINE1-RELATED Genomic Order:  1703
Name:  ? Glyma.09G170300 Secondary Identifier:  ? PAC:30485265
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G170300 0.5kb upstream 0.5kb upstream 2289 true Chr09: 39524620-39526908 Glycine max
Glyma.09G170300 0.5kb upstream 0.5kb upstream 500 false Chr09: 39524620-39525119 Glycine max
Glyma.09G170300 0.5kb downstream 0.5kb downstream 2289 true Chr09: 39525120-39527408 Glycine max
Glyma.09G170300 0.5kb downstream 0.5kb downstream 500 false Chr09: 39526909-39527408 Glycine max
Glyma.09G170300 1.0kb upstream 1.0kb upstream 2789 true Chr09: 39524120-39526908 Glycine max
Glyma.09G170300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39524120-39525119 Glycine max
Glyma.09G170300 1.0kb downstream 1.0kb downstream 2789 true Chr09: 39525120-39527908 Glycine max
Glyma.09G170300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39526909-39527908 Glycine max
Glyma.09G170300 2.0kb upstream 2.0kb upstream 3789 true Chr09: 39523120-39526908 Glycine max
Glyma.09G170300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39523120-39525119 Glycine max
Glyma.09G170300 2.0kb downstream 2.0kb downstream 3789 true Chr09: 39525120-39528908 Glycine max
Glyma.09G170300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39526909-39528908 Glycine max
Glyma.09G170300 5.0kb upstream 5.0kb upstream 6789 true Chr09: 39520120-39526908 Glycine max
Glyma.09G170300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39520120-39525119 Glycine max
Glyma.09G170300 5.0kb downstream 5.0kb downstream 6789 true Chr09: 39525120-39531908 Glycine max
Glyma.09G170300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39526909-39531908 Glycine max
Glyma.09G170300 10.0kb upstream 10.0kb upstream 11789 true Chr09: 39515120-39526908 Glycine max
Glyma.09G170300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39515120-39525119 Glycine max
Glyma.09G170300 10.0kb downstream 10.0kb downstream 11789 true Chr09: 39525120-39536908 Glycine max
Glyma.09G170300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39526909-39536908 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254958 5265 Fabidae View MSA
124070545 5270 Rosid View MSA
123750720 5271 Pentapetalae View MSA
122788133 5272 Eudicot View MSA
122049801 5273 Angiosperm View MSA
121311594 5274 Embryophyte View MSA
123348870 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9798 0.0 38.5662    
cufflinks 21.3678 0.0 81.6618 High High
cufflinks 10.5485 0.0 46.244    
cufflinks 6.97774 0.0 28.2022   Low
cufflinks 11.0762 0.0 46.8271    
cufflinks 15.5876 0.0 56.6075    
cufflinks 20.2434 0.0 106.09   High
cufflinks 8.29725 0.0 31.881   Low
cufflinks 12.6405 0.0 53.556    
cufflinks 9.577     High Low
cufflinks 16.778     High  
cufflinks 9.453     High Low
cufflinks 7.673     High Low
cufflinks 9.565     High Low
cufflinks 24.181     High High
cufflinks 12.862     High  
cufflinks 32.446     High High
cufflinks 9.604     High Low
cufflinks 16.414     High  
cufflinks 13.37     High  
cufflinks 15.677     High  
cufflinks 13.288     High  
cufflinks 16.396     High  
cufflinks 22.283     High High
cufflinks 13.384     High  
cufflinks 23.105     High High

0 Strain