Gene : Glyma.09G161300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11599:SF12 - PROTEASOME SUBUNIT ALPHA TYPE-1 Genomic Order:  1613
Name:  ? Glyma.09G161300 Secondary Identifier:  ? PAC:30485493
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G161300 0.5kb upstream 0.5kb upstream 3797 true Chr09: 38550513-38554309 Glycine max
Glyma.09G161300 0.5kb upstream 0.5kb upstream 500 false Chr09: 38553810-38554309 Glycine max
Glyma.09G161300 0.5kb downstream 0.5kb downstream 3797 true Chr09: 38550013-38553809 Glycine max
Glyma.09G161300 0.5kb downstream 0.5kb downstream 500 false Chr09: 38550013-38550512 Glycine max
Glyma.09G161300 1.0kb upstream 1.0kb upstream 4297 true Chr09: 38550513-38554809 Glycine max
Glyma.09G161300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38553810-38554809 Glycine max
Glyma.09G161300 1.0kb downstream 1.0kb downstream 4297 true Chr09: 38549513-38553809 Glycine max
Glyma.09G161300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38549513-38550512 Glycine max
Glyma.09G161300 2.0kb upstream 2.0kb upstream 5297 true Chr09: 38550513-38555809 Glycine max
Glyma.09G161300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38553810-38555809 Glycine max
Glyma.09G161300 2.0kb downstream 2.0kb downstream 5297 true Chr09: 38548513-38553809 Glycine max
Glyma.09G161300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38548513-38550512 Glycine max
Glyma.09G161300 5.0kb upstream 5.0kb upstream 8297 true Chr09: 38550513-38558809 Glycine max
Glyma.09G161300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38553810-38558809 Glycine max
Glyma.09G161300 5.0kb downstream 5.0kb downstream 8297 true Chr09: 38545513-38553809 Glycine max
Glyma.09G161300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38545513-38550512 Glycine max
Glyma.09G161300 10.0kb upstream 10.0kb upstream 13297 true Chr09: 38550513-38563809 Glycine max
Glyma.09G161300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38553810-38563809 Glycine max
Glyma.09G161300 10.0kb downstream 10.0kb downstream 13297 true Chr09: 38540513-38553809 Glycine max
Glyma.09G161300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38540513-38550512 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299393 5265 Fabidae View MSA
124065992 5270 Rosid View MSA
123739295 5271 Pentapetalae View MSA
122791097 5272 Eudicot View MSA
122046892 5273 Angiosperm View MSA
121347001 5274 Embryophyte View MSA
123424863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.0722 0.0 69.5589 High  
cufflinks 34.8001 0.0 93.2329 High  
cufflinks 27.1165 0.0 72.3471 High  
cufflinks 23.9054 0.0 63.7935 High Low
cufflinks 44.0008 0.0 119.445 High  
cufflinks 67.4511 0.0 189.43 High High
cufflinks 27.2779 0.0 72.7913 High  
cufflinks 46.3247 0.0 125.86 High  
cufflinks 38.4774 0.0 103.554 High  
cufflinks 14.014     High High
cufflinks 7.708     High  
cufflinks 7.367     High  
cufflinks 18.065     High High
cufflinks 21.237     High High
cufflinks 4.661       Low
cufflinks 8.944     High  
cufflinks 9.436     High  
cufflinks 8.456     High  
cufflinks 12.133     High  
cufflinks 6.43       Low
cufflinks 9.532     High  
cufflinks 7.67     High  
cufflinks 9.141     High  
cufflinks 9.142     High  
cufflinks 6.707        
cufflinks 11.234     High  

0 Strain