Gene : Glyma.09G164700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33925:SF2 - PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC Genomic Order:  1647
Name:  ? Glyma.09G164700 Secondary Identifier:  ? PAC:30485010
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G164700 0.5kb upstream 0.5kb upstream 6624 true Chr09: 38872830-38879453 Glycine max
Glyma.09G164700 0.5kb upstream 0.5kb upstream 500 false Chr09: 38872830-38873329 Glycine max
Glyma.09G164700 0.5kb downstream 0.5kb downstream 6624 true Chr09: 38873330-38879953 Glycine max
Glyma.09G164700 0.5kb downstream 0.5kb downstream 500 false Chr09: 38879454-38879953 Glycine max
Glyma.09G164700 1.0kb upstream 1.0kb upstream 7124 true Chr09: 38872330-38879453 Glycine max
Glyma.09G164700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38872330-38873329 Glycine max
Glyma.09G164700 1.0kb downstream 1.0kb downstream 7124 true Chr09: 38873330-38880453 Glycine max
Glyma.09G164700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38879454-38880453 Glycine max
Glyma.09G164700 2.0kb upstream 2.0kb upstream 8124 true Chr09: 38871330-38879453 Glycine max
Glyma.09G164700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38871330-38873329 Glycine max
Glyma.09G164700 2.0kb downstream 2.0kb downstream 8124 true Chr09: 38873330-38881453 Glycine max
Glyma.09G164700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38879454-38881453 Glycine max
Glyma.09G164700 5.0kb upstream 5.0kb upstream 11124 true Chr09: 38868330-38879453 Glycine max
Glyma.09G164700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38868330-38873329 Glycine max
Glyma.09G164700 5.0kb downstream 5.0kb downstream 11124 true Chr09: 38873330-38884453 Glycine max
Glyma.09G164700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38879454-38884453 Glycine max
Glyma.09G164700 10.0kb upstream 10.0kb upstream 16124 true Chr09: 38863330-38879453 Glycine max
Glyma.09G164700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38863330-38873329 Glycine max
Glyma.09G164700 10.0kb downstream 10.0kb downstream 16124 true Chr09: 38873330-38889453 Glycine max
Glyma.09G164700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38879454-38889453 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306897 5265 Fabidae View MSA
124060775 5270 Rosid View MSA
123739322 5271 Pentapetalae View MSA
122788542 5272 Eudicot View MSA
122051144 5273 Angiosperm View MSA
121351206 5274 Embryophyte View MSA
123426631 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.22752 0.0 8.78132    
cufflinks 4.9043 0.0 18.1531   High
cufflinks 2.45256 0.0 8.90685    
cufflinks 3.43005 0.0 13.6962    
cufflinks 2.91472 0.0 12.162    
cufflinks 2.51517 0.0 9.46687    
cufflinks 2.78483 0.0 9.86832    
cufflinks 1.9786 0.0 8.31723   Low
cufflinks 2.59124 0.0 11.1377    
cufflinks 1.667        
cufflinks 0.308       Low
cufflinks 1.318        
cufflinks 1.192        
cufflinks 1.478        
cufflinks 0.395       Low
cufflinks 2.044        
cufflinks 0.598        
cufflinks 2.197        
cufflinks 2.354       High
cufflinks 1.971        
cufflinks 0.416       Low
cufflinks 2.005        
cufflinks 2.537       High
cufflinks 0.334       Low
cufflinks 1.789        
cufflinks 0.44       Low

0 Strain