Gene : Glyma.09G164900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11117 - SUCCINYL-COA SYNTHETASE-RELATED Genomic Order:  1649
Name:  ? Glyma.09G164900 Secondary Identifier:  ? PAC:30484181
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G164900 0.5kb upstream 0.5kb upstream 5734 true Chr09: 38901988-38907721 Glycine max
Glyma.09G164900 0.5kb upstream 0.5kb upstream 500 false Chr09: 38901988-38902487 Glycine max
Glyma.09G164900 0.5kb downstream 0.5kb downstream 5734 true Chr09: 38902488-38908221 Glycine max
Glyma.09G164900 0.5kb downstream 0.5kb downstream 500 false Chr09: 38907722-38908221 Glycine max
Glyma.09G164900 1.0kb upstream 1.0kb upstream 6234 true Chr09: 38901488-38907721 Glycine max
Glyma.09G164900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38901488-38902487 Glycine max
Glyma.09G164900 1.0kb downstream 1.0kb downstream 6234 true Chr09: 38902488-38908721 Glycine max
Glyma.09G164900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38907722-38908721 Glycine max
Glyma.09G164900 2.0kb upstream 2.0kb upstream 7234 true Chr09: 38900488-38907721 Glycine max
Glyma.09G164900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38900488-38902487 Glycine max
Glyma.09G164900 2.0kb downstream 2.0kb downstream 7234 true Chr09: 38902488-38909721 Glycine max
Glyma.09G164900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38907722-38909721 Glycine max
Glyma.09G164900 5.0kb upstream 5.0kb upstream 10234 true Chr09: 38897488-38907721 Glycine max
Glyma.09G164900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38897488-38902487 Glycine max
Glyma.09G164900 5.0kb downstream 5.0kb downstream 10234 true Chr09: 38902488-38912721 Glycine max
Glyma.09G164900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38907722-38912721 Glycine max
Glyma.09G164900 10.0kb upstream 10.0kb upstream 15234 true Chr09: 38892488-38907721 Glycine max
Glyma.09G164900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38892488-38902487 Glycine max
Glyma.09G164900 10.0kb downstream 10.0kb downstream 15234 true Chr09: 38902488-38917721 Glycine max
Glyma.09G164900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38907722-38917721 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300000 5265 Fabidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6183 0.0 71.8468 High  
cufflinks 21.4917 0.0 57.5148 High  
cufflinks 13.3321 0.0 35.6614   Low
cufflinks 17.652 0.0 47.1032    
cufflinks 33.4265 0.0 91.7308 High  
cufflinks 41.9265 0.0 117.406 High High
cufflinks 13.2505 0.0 35.438   Low
cufflinks 24.0902 0.0 64.7274 High  
cufflinks 26.6461 0.0 71.9614 High  
cufflinks 8.162     High High
cufflinks 3.879        
cufflinks 4.427        
cufflinks 9.927     High High
cufflinks 10.66     High High
cufflinks 3.236       Low
cufflinks 4.712        
cufflinks 4.583        
cufflinks 5.189        
cufflinks 6.019        
cufflinks 4.081        
cufflinks 3.855        
cufflinks 4.362        
cufflinks 4.38        
cufflinks 4.766        
cufflinks 3.916        
cufflinks 4.519        

0 Strain