Gene : Glyma.09G151000 G. max Wm82.a2.v1
Defline:  (1 of 14) PF00077 - Retroviral aspartyl protease (RVP) Genomic Order:  1510
Name:  ? Glyma.09G151000 Secondary Identifier:  ? PAC:30485499
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G151000 0.5kb upstream 0.5kb upstream 4732 true Chr09: 37242756-37247487 Glycine max
Glyma.09G151000 0.5kb upstream 0.5kb upstream 500 false Chr09: 37246988-37247487 Glycine max
Glyma.09G151000 0.5kb downstream 0.5kb downstream 4732 true Chr09: 37242256-37246987 Glycine max
Glyma.09G151000 0.5kb downstream 0.5kb downstream 500 false Chr09: 37242256-37242755 Glycine max
Glyma.09G151000 1.0kb upstream 1.0kb upstream 5232 true Chr09: 37242756-37247987 Glycine max
Glyma.09G151000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37246988-37247987 Glycine max
Glyma.09G151000 1.0kb downstream 1.0kb downstream 5232 true Chr09: 37241756-37246987 Glycine max
Glyma.09G151000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37241756-37242755 Glycine max
Glyma.09G151000 2.0kb upstream 2.0kb upstream 6232 true Chr09: 37242756-37248987 Glycine max
Glyma.09G151000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37246988-37248987 Glycine max
Glyma.09G151000 2.0kb downstream 2.0kb downstream 6232 true Chr09: 37240756-37246987 Glycine max
Glyma.09G151000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37240756-37242755 Glycine max
Glyma.09G151000 5.0kb upstream 5.0kb upstream 9232 true Chr09: 37242756-37251987 Glycine max
Glyma.09G151000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37246988-37251987 Glycine max
Glyma.09G151000 5.0kb downstream 5.0kb downstream 9232 true Chr09: 37237756-37246987 Glycine max
Glyma.09G151000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37237756-37242755 Glycine max
Glyma.09G151000 10.0kb upstream 10.0kb upstream 14232 true Chr09: 37242756-37256987 Glycine max
Glyma.09G151000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37246988-37256987 Glycine max
Glyma.09G151000 10.0kb downstream 10.0kb downstream 14232 true Chr09: 37232756-37246987 Glycine max
Glyma.09G151000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37232756-37242755 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122250435 5265 Fabidae View MSA
124040401 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0167819 0.0 0.0716811 Low  
cufflinks 0.0163472 0.0 0.069944 Low  
cufflinks 0.0320044 0.0 0.1307 Low  
cufflinks 0.0148772 0.0 0.0642384 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0232293 0.0 0.0969962 Low  
cufflinks 0.0670972 0.0 0.265877 Low High
cufflinks 0.0348214 0.0 0.141863 Low  
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.005     Low  
cufflinks 0.009     Low  
cufflinks 0.018     Low High
cufflinks 0.005     Low  
cufflinks 0.008     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.019     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain