Gene : Glyma.09G154400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10264:SF69 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 Genomic Order:  1544
Name:  ? Glyma.09G154400 Secondary Identifier:  ? PAC:30484081
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G154400 0.5kb upstream 0.5kb upstream 2850 true Chr09: 37729925-37732774 Glycine max
Glyma.09G154400 0.5kb upstream 0.5kb upstream 500 false Chr09: 37732275-37732774 Glycine max
Glyma.09G154400 0.5kb downstream 0.5kb downstream 2850 true Chr09: 37729425-37732274 Glycine max
Glyma.09G154400 0.5kb downstream 0.5kb downstream 500 false Chr09: 37729425-37729924 Glycine max
Glyma.09G154400 1.0kb upstream 1.0kb upstream 3350 true Chr09: 37729925-37733274 Glycine max
Glyma.09G154400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37732275-37733274 Glycine max
Glyma.09G154400 1.0kb downstream 1.0kb downstream 3350 true Chr09: 37728925-37732274 Glycine max
Glyma.09G154400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37728925-37729924 Glycine max
Glyma.09G154400 2.0kb upstream 2.0kb upstream 4350 true Chr09: 37729925-37734274 Glycine max
Glyma.09G154400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37732275-37734274 Glycine max
Glyma.09G154400 2.0kb downstream 2.0kb downstream 4350 true Chr09: 37727925-37732274 Glycine max
Glyma.09G154400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37727925-37729924 Glycine max
Glyma.09G154400 5.0kb upstream 5.0kb upstream 7350 true Chr09: 37729925-37737274 Glycine max
Glyma.09G154400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37732275-37737274 Glycine max
Glyma.09G154400 5.0kb downstream 5.0kb downstream 7350 true Chr09: 37724925-37732274 Glycine max
Glyma.09G154400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37724925-37729924 Glycine max
Glyma.09G154400 10.0kb upstream 10.0kb upstream 12350 true Chr09: 37729925-37742274 Glycine max
Glyma.09G154400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37732275-37742274 Glycine max
Glyma.09G154400 10.0kb downstream 10.0kb downstream 12350 true Chr09: 37719925-37732274 Glycine max
Glyma.09G154400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37719925-37729924 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305213 5265 Fabidae View MSA
124064454 5270 Rosid View MSA
123736797 5271 Pentapetalae View MSA
122786517 5272 Eudicot View MSA
122047098 5273 Angiosperm View MSA
121346579 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6093 0.0 29.8667    
cufflinks 5.28566 0.0 16.2702   Low
cufflinks 13.8883 0.0 38.0841    
cufflinks 17.0612 0.0 46.1617    
cufflinks 11.6961 0.0 32.5091    
cufflinks 18.976 0.0 51.1459   High
cufflinks 11.6156 0.0 32.3355    
cufflinks 16.1457 0.0 43.8115    
cufflinks 10.3462 0.0 29.1094    
cufflinks 6.34        
cufflinks 5.806     High  
cufflinks 6.551        
cufflinks 4.227        
cufflinks 5.096        
cufflinks 3.922       Low
cufflinks 4.304        
cufflinks 12.028     High High
cufflinks 6.893        
cufflinks 3.736       Low
cufflinks 4.721        
cufflinks 7.215     High  
cufflinks 4.726        
cufflinks 4.368        
cufflinks 6.966     High  
cufflinks 4.377        
cufflinks 6.971     High  

0 Strain