Gene : Glyma.09G204000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR34190:SF3 - MICROSPORE-SPECIFIC PROMOTER 2 Genomic Order:  2040
Name:  ? Glyma.09G204000 Secondary Identifier:  ? PAC:30484320
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G204000 0.5kb upstream 0.5kb upstream 2910 true Chr09: 42824444-42827353 Glycine max
Glyma.09G204000 0.5kb upstream 0.5kb upstream 500 false Chr09: 42824444-42824943 Glycine max
Glyma.09G204000 0.5kb downstream 0.5kb downstream 2910 true Chr09: 42824944-42827853 Glycine max
Glyma.09G204000 0.5kb downstream 0.5kb downstream 500 false Chr09: 42827354-42827853 Glycine max
Glyma.09G204000 1.0kb upstream 1.0kb upstream 3410 true Chr09: 42823944-42827353 Glycine max
Glyma.09G204000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 42823944-42824943 Glycine max
Glyma.09G204000 1.0kb downstream 1.0kb downstream 3410 true Chr09: 42824944-42828353 Glycine max
Glyma.09G204000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 42827354-42828353 Glycine max
Glyma.09G204000 2.0kb upstream 2.0kb upstream 4410 true Chr09: 42822944-42827353 Glycine max
Glyma.09G204000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 42822944-42824943 Glycine max
Glyma.09G204000 2.0kb downstream 2.0kb downstream 4410 true Chr09: 42824944-42829353 Glycine max
Glyma.09G204000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 42827354-42829353 Glycine max
Glyma.09G204000 5.0kb upstream 5.0kb upstream 7410 true Chr09: 42819944-42827353 Glycine max
Glyma.09G204000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 42819944-42824943 Glycine max
Glyma.09G204000 5.0kb downstream 5.0kb downstream 7410 true Chr09: 42824944-42832353 Glycine max
Glyma.09G204000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 42827354-42832353 Glycine max
Glyma.09G204000 10.0kb upstream 10.0kb upstream 12410 true Chr09: 42814944-42827353 Glycine max
Glyma.09G204000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 42814944-42824943 Glycine max
Glyma.09G204000 10.0kb downstream 10.0kb downstream 12410 true Chr09: 42824944-42837353 Glycine max
Glyma.09G204000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 42827354-42837353 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791974 5273 Angiosperm View MSA
122299029 5265 Fabidae View MSA
124068285 5270 Rosid View MSA
123748958 5271 Pentapetalae View MSA
122795694 5272 Eudicot View MSA
121063238 5274 Embryophyte View MSA
123103002 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0429434 0.0 0.194213 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0267723 0.0 0.126666 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0720424 0.0 0.311073 Low  
cufflinks 0.0805112 0.0 0.345033 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.818664 0.0 3.12748   High
cufflinks 0.420124 0.0 1.65115    
cufflinks 0.012     Low Low
cufflinks 0.4        
cufflinks 0.516        
cufflinks 0.085     Low  
cufflinks 0.025     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.153        
cufflinks 2.588       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.138        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.174        

0 Strain