Gene : Glyma.09G207400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10694:SF33 - TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN Genomic Order:  2074
Name:  ? Glyma.09G207400 Secondary Identifier:  ? PAC:30486460
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G207400 0.5kb upstream 0.5kb upstream 6908 true Chr09: 43170742-43177649 Glycine max
Glyma.09G207400 0.5kb upstream 0.5kb upstream 500 false Chr09: 43177150-43177649 Glycine max
Glyma.09G207400 0.5kb downstream 0.5kb downstream 6908 true Chr09: 43170242-43177149 Glycine max
Glyma.09G207400 0.5kb downstream 0.5kb downstream 500 false Chr09: 43170242-43170741 Glycine max
Glyma.09G207400 1.0kb upstream 1.0kb upstream 7408 true Chr09: 43170742-43178149 Glycine max
Glyma.09G207400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 43177150-43178149 Glycine max
Glyma.09G207400 1.0kb downstream 1.0kb downstream 7408 true Chr09: 43169742-43177149 Glycine max
Glyma.09G207400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 43169742-43170741 Glycine max
Glyma.09G207400 2.0kb upstream 2.0kb upstream 8408 true Chr09: 43170742-43179149 Glycine max
Glyma.09G207400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 43177150-43179149 Glycine max
Glyma.09G207400 2.0kb downstream 2.0kb downstream 8408 true Chr09: 43168742-43177149 Glycine max
Glyma.09G207400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 43168742-43170741 Glycine max
Glyma.09G207400 5.0kb upstream 5.0kb upstream 11408 true Chr09: 43170742-43182149 Glycine max
Glyma.09G207400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 43177150-43182149 Glycine max
Glyma.09G207400 5.0kb downstream 5.0kb downstream 11408 true Chr09: 43165742-43177149 Glycine max
Glyma.09G207400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 43165742-43170741 Glycine max
Glyma.09G207400 10.0kb upstream 10.0kb upstream 16408 true Chr09: 43170742-43187149 Glycine max
Glyma.09G207400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 43177150-43187149 Glycine max
Glyma.09G207400 10.0kb downstream 10.0kb downstream 16408 true Chr09: 43160742-43177149 Glycine max
Glyma.09G207400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 43160742-43170741 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303310 5265 Fabidae View MSA
124063293 5270 Rosid View MSA
123753636 5271 Pentapetalae View MSA
122788405 5272 Eudicot View MSA
122042889 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121310039 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.19535 0.0 18.3296    
cufflinks 7.15794 0.0 24.5422    
cufflinks 9.7592 0.0 33.3283    
cufflinks 2.6422 0.0 10.7085   Low
cufflinks 6.65308 0.0 22.9536    
cufflinks 13.6251 0.0 47.5467   High
cufflinks 5.47452 0.0 19.2565    
cufflinks 3.54704 0.0 13.3422   Low
cufflinks 6.536 0.0 22.5839    
cufflinks 7.96     High  
cufflinks 15.111     High  
cufflinks 3.673        
cufflinks 4.857        
cufflinks 4.032        
cufflinks 8.579     High  
cufflinks 3.775        
cufflinks 44.034     High High
cufflinks 4.886        
cufflinks 2.165       Low
cufflinks 4.33        
cufflinks 16.833     High High
cufflinks 4.078        
cufflinks 6.915        
cufflinks 10.967     High  
cufflinks 3.885        
cufflinks 31.649     High High

0 Strain