Gene : Glyma.09G195000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12497:SF1 - N-ACYLPHOSPHATIDYLETHANOLAMINE SYNTHASE Genomic Order:  1950
Name:  ? Glyma.09G195000 Secondary Identifier:  ? PAC:30485446
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5995 Glycine max pathologic  
Gmax PWY-6433 Glycine max pathologic  
Gmax PWY-6803 Glycine max pathologic  
Gmax PWY-7409 Glycine max pathologic  
Gmax PWY-7416 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G195000 0.5kb upstream 0.5kb upstream 5464 true Chr09: 41962782-41968245 Glycine max
Glyma.09G195000 0.5kb upstream 0.5kb upstream 500 false Chr09: 41967746-41968245 Glycine max
Glyma.09G195000 0.5kb downstream 0.5kb downstream 5464 true Chr09: 41962282-41967745 Glycine max
Glyma.09G195000 0.5kb downstream 0.5kb downstream 500 false Chr09: 41962282-41962781 Glycine max
Glyma.09G195000 1.0kb upstream 1.0kb upstream 5964 true Chr09: 41962782-41968745 Glycine max
Glyma.09G195000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 41967746-41968745 Glycine max
Glyma.09G195000 1.0kb downstream 1.0kb downstream 5964 true Chr09: 41961782-41967745 Glycine max
Glyma.09G195000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 41961782-41962781 Glycine max
Glyma.09G195000 2.0kb upstream 2.0kb upstream 6964 true Chr09: 41962782-41969745 Glycine max
Glyma.09G195000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 41967746-41969745 Glycine max
Glyma.09G195000 2.0kb downstream 2.0kb downstream 6964 true Chr09: 41960782-41967745 Glycine max
Glyma.09G195000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 41960782-41962781 Glycine max
Glyma.09G195000 5.0kb upstream 5.0kb upstream 9964 true Chr09: 41962782-41972745 Glycine max
Glyma.09G195000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 41967746-41972745 Glycine max
Glyma.09G195000 5.0kb downstream 5.0kb downstream 9964 true Chr09: 41957782-41967745 Glycine max
Glyma.09G195000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 41957782-41962781 Glycine max
Glyma.09G195000 10.0kb upstream 10.0kb upstream 14964 true Chr09: 41962782-41977745 Glycine max
Glyma.09G195000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 41967746-41977745 Glycine max
Glyma.09G195000 10.0kb downstream 10.0kb downstream 14964 true Chr09: 41952782-41967745 Glycine max
Glyma.09G195000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 41952782-41962781 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307884 5265 Fabidae View MSA
124050156 5270 Rosid View MSA
123738586 5271 Pentapetalae View MSA
122788157 5272 Eudicot View MSA
122042520 5273 Angiosperm View MSA
121345475 5274 Embryophyte View MSA
123428376 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.53719 0.0 27.3561   High
cufflinks 2.22692 0.0 16.7359    
cufflinks 2.25856 0.0 15.3943    
cufflinks 4.5657 0.0 35.4637   High
cufflinks 2.68138 0.0 21.2224    
cufflinks 2.79318 0.0 14.9443    
cufflinks 2.57939 0.0 18.1202    
cufflinks 3.2442 0.0 28.0994    
cufflinks 1.96087 0.0 11.6727   Low
cufflinks 0.053     Low  
cufflinks 0.064        
cufflinks 0.083     Low  
cufflinks 0.091     Low  
cufflinks 0.108        
cufflinks 0.035     Low Low
cufflinks 0.098     Low  
cufflinks 0.047     Low Low
cufflinks 0.093     Low  
cufflinks 0.076     Low  
cufflinks 0.139       High
cufflinks 0.104        
cufflinks 0.106        
cufflinks 0.043     Low Low
cufflinks 0.087        
cufflinks 0.111        
cufflinks 0.061     Low  

0 Strain