Gene : Glyma.09G196100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14374 - FOIE GRAS Genomic Order:  1961
Name:  ? Glyma.09G196100 Secondary Identifier:  ? PAC:30483661
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G196100 0.5kb upstream 0.5kb upstream 7130 true Chr09: 42072633-42079762 Glycine max
Glyma.09G196100 0.5kb upstream 0.5kb upstream 500 false Chr09: 42072633-42073132 Glycine max
Glyma.09G196100 0.5kb downstream 0.5kb downstream 7130 true Chr09: 42073133-42080262 Glycine max
Glyma.09G196100 0.5kb downstream 0.5kb downstream 500 false Chr09: 42079763-42080262 Glycine max
Glyma.09G196100 1.0kb upstream 1.0kb upstream 7630 true Chr09: 42072133-42079762 Glycine max
Glyma.09G196100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 42072133-42073132 Glycine max
Glyma.09G196100 1.0kb downstream 1.0kb downstream 7630 true Chr09: 42073133-42080762 Glycine max
Glyma.09G196100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 42079763-42080762 Glycine max
Glyma.09G196100 2.0kb upstream 2.0kb upstream 8630 true Chr09: 42071133-42079762 Glycine max
Glyma.09G196100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 42071133-42073132 Glycine max
Glyma.09G196100 2.0kb downstream 2.0kb downstream 8630 true Chr09: 42073133-42081762 Glycine max
Glyma.09G196100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 42079763-42081762 Glycine max
Glyma.09G196100 5.0kb upstream 5.0kb upstream 11630 true Chr09: 42068133-42079762 Glycine max
Glyma.09G196100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 42068133-42073132 Glycine max
Glyma.09G196100 5.0kb downstream 5.0kb downstream 11630 true Chr09: 42073133-42084762 Glycine max
Glyma.09G196100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 42079763-42084762 Glycine max
Glyma.09G196100 10.0kb upstream 10.0kb upstream 16630 true Chr09: 42063133-42079762 Glycine max
Glyma.09G196100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 42063133-42073132 Glycine max
Glyma.09G196100 10.0kb downstream 10.0kb downstream 16630 true Chr09: 42073133-42089762 Glycine max
Glyma.09G196100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 42079763-42089762 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305098 5265 Fabidae View MSA
124064805 5270 Rosid View MSA
123736762 5271 Pentapetalae View MSA
122791582 5272 Eudicot View MSA
122043312 5273 Angiosperm View MSA
121344213 5274 Embryophyte View MSA
123424379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.66099 0.0 10.0136    
cufflinks 4.18558 0.0 11.351    
cufflinks 2.27165 0.0 6.49014   Low
cufflinks 3.90621 0.0 10.633    
cufflinks 8.09425 0.0 21.6041   High
cufflinks 4.53546 0.0 12.2434    
cufflinks 4.86942 0.0 13.111    
cufflinks 5.86811 0.0 15.6928    
cufflinks 4.7531 0.0 12.8031    
cufflinks 5.643       High
cufflinks 0.936       Low
cufflinks 2.451        
cufflinks 6.85       High
cufflinks 9.543     High High
cufflinks 1.064       Low
cufflinks 3.013        
cufflinks 1.827        
cufflinks 4.877        
cufflinks 4.483        
cufflinks 2.647        
cufflinks 1.636        
cufflinks 2.912        
cufflinks 3.799        
cufflinks 1.684        
cufflinks 2.369        
cufflinks 2.212        

0 Strain