Gene : Glyma.09G196600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14659:SF1 - ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34 Genomic Order:  1966
Name:  ? Glyma.09G196600 Secondary Identifier:  ? PAC:30485999
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G196600 0.5kb upstream 0.5kb upstream 3265 true Chr09: 42116284-42119548 Glycine max
Glyma.09G196600 0.5kb upstream 0.5kb upstream 500 false Chr09: 42116284-42116783 Glycine max
Glyma.09G196600 0.5kb downstream 0.5kb downstream 3265 true Chr09: 42116784-42120048 Glycine max
Glyma.09G196600 0.5kb downstream 0.5kb downstream 500 false Chr09: 42119549-42120048 Glycine max
Glyma.09G196600 1.0kb upstream 1.0kb upstream 3765 true Chr09: 42115784-42119548 Glycine max
Glyma.09G196600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 42115784-42116783 Glycine max
Glyma.09G196600 1.0kb downstream 1.0kb downstream 3765 true Chr09: 42116784-42120548 Glycine max
Glyma.09G196600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 42119549-42120548 Glycine max
Glyma.09G196600 2.0kb upstream 2.0kb upstream 4765 true Chr09: 42114784-42119548 Glycine max
Glyma.09G196600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 42114784-42116783 Glycine max
Glyma.09G196600 2.0kb downstream 2.0kb downstream 4765 true Chr09: 42116784-42121548 Glycine max
Glyma.09G196600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 42119549-42121548 Glycine max
Glyma.09G196600 5.0kb upstream 5.0kb upstream 7765 true Chr09: 42111784-42119548 Glycine max
Glyma.09G196600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 42111784-42116783 Glycine max
Glyma.09G196600 5.0kb downstream 5.0kb downstream 7765 true Chr09: 42116784-42124548 Glycine max
Glyma.09G196600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 42119549-42124548 Glycine max
Glyma.09G196600 10.0kb upstream 10.0kb upstream 12765 true Chr09: 42106784-42119548 Glycine max
Glyma.09G196600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 42106784-42116783 Glycine max
Glyma.09G196600 10.0kb downstream 10.0kb downstream 12765 true Chr09: 42116784-42129548 Glycine max
Glyma.09G196600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 42119549-42129548 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309106 5265 Fabidae View MSA
124067682 5270 Rosid View MSA
123740476 5271 Pentapetalae View MSA
122792168 5272 Eudicot View MSA
122047585 5273 Angiosperm View MSA
121347157 5274 Embryophyte View MSA
123426154 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.66061 0.0 26.2153    
cufflinks 11.6899 0.0 31.4347    
cufflinks 8.30871 0.0 22.7304   Low
cufflinks 13.0227 0.0 34.8798    
cufflinks 13.4068 0.0 35.8863    
cufflinks 9.96799 0.0 27.0026    
cufflinks 16.1579 0.0 43.124   High
cufflinks 9.62424 0.0 26.1197    
cufflinks 13.4684 0.0 36.048    
cufflinks 7.636     High  
cufflinks 4.181       Low
cufflinks 10.051     High High
cufflinks 9.36     High  
cufflinks 11.887     High High
cufflinks 3.826       Low
cufflinks 6.484        
cufflinks 5.734        
cufflinks 10.119     High High
cufflinks 8.338     High  
cufflinks 6.622        
cufflinks 5.34        
cufflinks 6.964        
cufflinks 8.609     High  
cufflinks 5.916        
cufflinks 5.723        
cufflinks 5.168        

0 Strain