Gene : Glyma.09G197000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13954 - IRE1-RELATED Genomic Order:  1970
Name:  ? Glyma.09G197000 Secondary Identifier:  ? PAC:30484698
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G197000 0.5kb upstream 0.5kb upstream 12304 true Chr09: 42169240-42181543 Glycine max
Glyma.09G197000 0.5kb upstream 0.5kb upstream 500 false Chr09: 42169240-42169739 Glycine max
Glyma.09G197000 0.5kb downstream 0.5kb downstream 12304 true Chr09: 42169740-42182043 Glycine max
Glyma.09G197000 0.5kb downstream 0.5kb downstream 500 false Chr09: 42181544-42182043 Glycine max
Glyma.09G197000 1.0kb upstream 1.0kb upstream 12804 true Chr09: 42168740-42181543 Glycine max
Glyma.09G197000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 42168740-42169739 Glycine max
Glyma.09G197000 1.0kb downstream 1.0kb downstream 12804 true Chr09: 42169740-42182543 Glycine max
Glyma.09G197000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 42181544-42182543 Glycine max
Glyma.09G197000 2.0kb upstream 2.0kb upstream 13804 true Chr09: 42167740-42181543 Glycine max
Glyma.09G197000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 42167740-42169739 Glycine max
Glyma.09G197000 2.0kb downstream 2.0kb downstream 13804 true Chr09: 42169740-42183543 Glycine max
Glyma.09G197000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 42181544-42183543 Glycine max
Glyma.09G197000 5.0kb upstream 5.0kb upstream 16804 true Chr09: 42164740-42181543 Glycine max
Glyma.09G197000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 42164740-42169739 Glycine max
Glyma.09G197000 5.0kb downstream 5.0kb downstream 16804 true Chr09: 42169740-42186543 Glycine max
Glyma.09G197000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 42181544-42186543 Glycine max
Glyma.09G197000 10.0kb upstream 10.0kb upstream 21804 true Chr09: 42159740-42181543 Glycine max
Glyma.09G197000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 42159740-42169739 Glycine max
Glyma.09G197000 10.0kb downstream 10.0kb downstream 21804 true Chr09: 42169740-42191543 Glycine max
Glyma.09G197000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 42181544-42191543 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313681 5265 Fabidae View MSA
124069221 5270 Rosid View MSA
123736649 5271 Pentapetalae View MSA
122796979 5272 Eudicot View MSA
122047028 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121347978 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.58525 0.0 9.62022    
cufflinks 2.26385 0.0 9.77326   Low
cufflinks 4.57088 0.0 18.0538   High
cufflinks 3.64926 0.0 15.3213    
cufflinks 2.89314 0.0 13.2984    
cufflinks 2.00217 0.0 6.19838   Low
cufflinks 3.31875 0.0 11.5514    
cufflinks 2.90683 0.0 10.3478    
cufflinks 5.03797 0.0 19.6188   High
cufflinks 1.303       High
cufflinks 0.67        
cufflinks 0.805        
cufflinks 0.87        
cufflinks 0.324       Low
cufflinks 0.888        
cufflinks 0.516        
cufflinks 1.989       High
cufflinks 0.85        
cufflinks 0.59        
cufflinks 0.525        
cufflinks 0.441       Low
cufflinks 0.56        
cufflinks 0.607        
cufflinks 0.676        
cufflinks 0.453        
cufflinks 1.168       High

0 Strain