Gene : Glyma.09G197900 G. max Wm82.a2.v1
Genomic Order:  1979 Name:  ? Glyma.09G197900
Secondary Identifier:  ? PAC:30486185
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G197900 0.5kb upstream 0.5kb upstream 3164 true Chr09: 42241619-42244782 Glycine max
Glyma.09G197900 0.5kb upstream 0.5kb upstream 500 false Chr09: 42244283-42244782 Glycine max
Glyma.09G197900 0.5kb downstream 0.5kb downstream 3164 true Chr09: 42241119-42244282 Glycine max
Glyma.09G197900 0.5kb downstream 0.5kb downstream 500 false Chr09: 42241119-42241618 Glycine max
Glyma.09G197900 1.0kb upstream 1.0kb upstream 3664 true Chr09: 42241619-42245282 Glycine max
Glyma.09G197900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 42244283-42245282 Glycine max
Glyma.09G197900 1.0kb downstream 1.0kb downstream 3664 true Chr09: 42240619-42244282 Glycine max
Glyma.09G197900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 42240619-42241618 Glycine max
Glyma.09G197900 2.0kb upstream 2.0kb upstream 4664 true Chr09: 42241619-42246282 Glycine max
Glyma.09G197900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 42244283-42246282 Glycine max
Glyma.09G197900 2.0kb downstream 2.0kb downstream 4664 true Chr09: 42239619-42244282 Glycine max
Glyma.09G197900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 42239619-42241618 Glycine max
Glyma.09G197900 5.0kb upstream 5.0kb upstream 7664 true Chr09: 42241619-42249282 Glycine max
Glyma.09G197900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 42244283-42249282 Glycine max
Glyma.09G197900 5.0kb downstream 5.0kb downstream 7664 true Chr09: 42236619-42244282 Glycine max
Glyma.09G197900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 42236619-42241618 Glycine max
Glyma.09G197900 10.0kb upstream 10.0kb upstream 12664 true Chr09: 42241619-42254282 Glycine max
Glyma.09G197900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 42244283-42254282 Glycine max
Glyma.09G197900 10.0kb downstream 10.0kb downstream 12664 true Chr09: 42231619-42244282 Glycine max
Glyma.09G197900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 42231619-42241618 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026567 5273 Angiosperm View MSA
122310541 5265 Fabidae View MSA
124064879 5270 Rosid View MSA
123743574 5271 Pentapetalae View MSA
122787338 5272 Eudicot View MSA
121296393 5274 Embryophyte View MSA
123334564 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.45522 0.0 17.7677   High
cufflinks 4.13511 0.0 11.889   Low
cufflinks 5.96289 0.0 16.4656    
cufflinks 4.79139 0.0 13.5297    
cufflinks 4.23931 0.0 12.1841   Low
cufflinks 6.43747 0.0 17.7135    
cufflinks 6.5151 0.0 17.955   High
cufflinks 5.75167 0.0 15.9538    
cufflinks 4.68192 0.0 13.2777    
cufflinks 4.947        
cufflinks 7.691     High High
cufflinks 5.438        
cufflinks 4.598       Low
cufflinks 5.216        
cufflinks 4.595       Low
cufflinks 5.869        
cufflinks 4.987        
cufflinks 5.781        
cufflinks 4.015       Low
cufflinks 5.43        
cufflinks 6.084     High  
cufflinks 6.171        
cufflinks 4.6       Low
cufflinks 8.147     High High
cufflinks 5.705        
cufflinks 7.321     High High

0 Strain