Gene : Glyma.09G188500 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR10383 - SERINE INCORPORATOR Genomic Order:  1885
Name:  ? Glyma.09G188500 Secondary Identifier:  ? PAC:30486991
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G188500 0.5kb upstream 0.5kb upstream 7177 true Chr09: 41293131-41300307 Glycine max
Glyma.09G188500 0.5kb upstream 0.5kb upstream 500 false Chr09: 41299808-41300307 Glycine max
Glyma.09G188500 0.5kb downstream 0.5kb downstream 7177 true Chr09: 41292631-41299807 Glycine max
Glyma.09G188500 0.5kb downstream 0.5kb downstream 500 false Chr09: 41292631-41293130 Glycine max
Glyma.09G188500 1.0kb upstream 1.0kb upstream 7677 true Chr09: 41293131-41300807 Glycine max
Glyma.09G188500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 41299808-41300807 Glycine max
Glyma.09G188500 1.0kb downstream 1.0kb downstream 7677 true Chr09: 41292131-41299807 Glycine max
Glyma.09G188500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 41292131-41293130 Glycine max
Glyma.09G188500 2.0kb upstream 2.0kb upstream 8677 true Chr09: 41293131-41301807 Glycine max
Glyma.09G188500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 41299808-41301807 Glycine max
Glyma.09G188500 2.0kb downstream 2.0kb downstream 8677 true Chr09: 41291131-41299807 Glycine max
Glyma.09G188500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 41291131-41293130 Glycine max
Glyma.09G188500 5.0kb upstream 5.0kb upstream 11677 true Chr09: 41293131-41304807 Glycine max
Glyma.09G188500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 41299808-41304807 Glycine max
Glyma.09G188500 5.0kb downstream 5.0kb downstream 11677 true Chr09: 41288131-41299807 Glycine max
Glyma.09G188500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 41288131-41293130 Glycine max
Glyma.09G188500 10.0kb upstream 10.0kb upstream 16677 true Chr09: 41293131-41309807 Glycine max
Glyma.09G188500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 41299808-41309807 Glycine max
Glyma.09G188500 10.0kb downstream 10.0kb downstream 16677 true Chr09: 41283131-41299807 Glycine max
Glyma.09G188500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 41283131-41293130 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297283 5265 Fabidae View MSA
124063391 5270 Rosid View MSA
123751443 5271 Pentapetalae View MSA
122793725 5272 Eudicot View MSA
122046221 5273 Angiosperm View MSA
121344586 5274 Embryophyte View MSA
123424460 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.43683 0.0 23.7493    
cufflinks 1.69729 0.0 7.90132    
cufflinks 60.9219 0.0 236.158 High High
cufflinks 7.99009 0.0 28.3488    
cufflinks 3.06804 0.0 12.1811    
cufflinks 1.69246 0.0 5.99564    
cufflinks 1.05474 0.0 4.225   Low
cufflinks 11.7099 0.0 40.2684    
cufflinks 5.41436 0.0 20.6185    
cufflinks 0.637        
cufflinks 0.191       Low
cufflinks 7.516     High High
cufflinks 0.919        
cufflinks 0.359        
cufflinks 0.125       Low
cufflinks 0.548        
cufflinks 0.221        
cufflinks 0.549        
cufflinks 0.463        
cufflinks 0.571        
cufflinks 0.235        
cufflinks 0.752        
cufflinks 0.734        
cufflinks 0.296        
cufflinks 0.566        
cufflinks 0.24        

0 Strain