Gene : Glyma.09G189600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33168:SF12 - EXPRESSED PROTEIN Genomic Order:  1896
Name:  ? Glyma.09G189600 Secondary Identifier:  ? PAC:30486759
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G189600 0.5kb upstream 0.5kb upstream 1244 true Chr09: 41442543-41443786 Glycine max
Glyma.09G189600 0.5kb upstream 0.5kb upstream 500 false Chr09: 41443287-41443786 Glycine max
Glyma.09G189600 0.5kb downstream 0.5kb downstream 1244 true Chr09: 41442043-41443286 Glycine max
Glyma.09G189600 0.5kb downstream 0.5kb downstream 500 false Chr09: 41442043-41442542 Glycine max
Glyma.09G189600 1.0kb upstream 1.0kb upstream 1744 true Chr09: 41442543-41444286 Glycine max
Glyma.09G189600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 41443287-41444286 Glycine max
Glyma.09G189600 1.0kb downstream 1.0kb downstream 1744 true Chr09: 41441543-41443286 Glycine max
Glyma.09G189600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 41441543-41442542 Glycine max
Glyma.09G189600 2.0kb upstream 2.0kb upstream 2744 true Chr09: 41442543-41445286 Glycine max
Glyma.09G189600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 41443287-41445286 Glycine max
Glyma.09G189600 2.0kb downstream 2.0kb downstream 2744 true Chr09: 41440543-41443286 Glycine max
Glyma.09G189600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 41440543-41442542 Glycine max
Glyma.09G189600 5.0kb upstream 5.0kb upstream 5744 true Chr09: 41442543-41448286 Glycine max
Glyma.09G189600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 41443287-41448286 Glycine max
Glyma.09G189600 5.0kb downstream 5.0kb downstream 5744 true Chr09: 41437543-41443286 Glycine max
Glyma.09G189600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 41437543-41442542 Glycine max
Glyma.09G189600 10.0kb upstream 10.0kb upstream 10744 true Chr09: 41442543-41453286 Glycine max
Glyma.09G189600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 41443287-41453286 Glycine max
Glyma.09G189600 10.0kb downstream 10.0kb downstream 10744 true Chr09: 41432543-41443286 Glycine max
Glyma.09G189600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 41432543-41442542 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254191 5265 Fabidae View MSA
124074176 5270 Rosid View MSA
123744638 5271 Pentapetalae View MSA
122795740 5272 Eudicot View MSA
122048464 5273 Angiosperm View MSA
121310979 5274 Embryophyte View MSA
123348342 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.142533 0.0 0.580653 Low  
cufflinks 0.0335929 0.0 0.152344 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.212129 0.0 0.849564 Low  
cufflinks 0.131604 0.0 0.538066 Low  
cufflinks 0.0312881 0.0 0.143306 Low Low
cufflinks 0.100695 0.0 0.417003 Low  
cufflinks 0.58406 0.0 2.24653   High
cufflinks 0.021     Low Low
cufflinks 6.429     High High
cufflinks 0.043     Low Low
cufflinks 0.427        
cufflinks 1.827        
cufflinks 4.341        
cufflinks 0.675        
cufflinks 1.143        
cufflinks 0.119        
cufflinks 0.052     Low Low
cufflinks 0.935        
cufflinks 9.345     High High
cufflinks 0.664        
cufflinks 0.702        
cufflinks 7.384     High High
cufflinks 0.711        
cufflinks 5.165       High

0 Strain