Gene : Glyma.09G191600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Genomic Order:  1916
Name:  ? Glyma.09G191600 Secondary Identifier:  ? PAC:30483981
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G191600 0.5kb upstream 0.5kb upstream 9062 true Chr09: 41631844-41640905 Glycine max
Glyma.09G191600 0.5kb upstream 0.5kb upstream 500 false Chr09: 41631844-41632343 Glycine max
Glyma.09G191600 0.5kb downstream 0.5kb downstream 9062 true Chr09: 41632344-41641405 Glycine max
Glyma.09G191600 0.5kb downstream 0.5kb downstream 500 false Chr09: 41640906-41641405 Glycine max
Glyma.09G191600 1.0kb upstream 1.0kb upstream 9562 true Chr09: 41631344-41640905 Glycine max
Glyma.09G191600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 41631344-41632343 Glycine max
Glyma.09G191600 1.0kb downstream 1.0kb downstream 9562 true Chr09: 41632344-41641905 Glycine max
Glyma.09G191600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 41640906-41641905 Glycine max
Glyma.09G191600 2.0kb upstream 2.0kb upstream 10562 true Chr09: 41630344-41640905 Glycine max
Glyma.09G191600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 41630344-41632343 Glycine max
Glyma.09G191600 2.0kb downstream 2.0kb downstream 10562 true Chr09: 41632344-41642905 Glycine max
Glyma.09G191600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 41640906-41642905 Glycine max
Glyma.09G191600 5.0kb upstream 5.0kb upstream 13562 true Chr09: 41627344-41640905 Glycine max
Glyma.09G191600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 41627344-41632343 Glycine max
Glyma.09G191600 5.0kb downstream 5.0kb downstream 13562 true Chr09: 41632344-41645905 Glycine max
Glyma.09G191600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 41640906-41645905 Glycine max
Glyma.09G191600 10.0kb upstream 10.0kb upstream 18562 true Chr09: 41622344-41640905 Glycine max
Glyma.09G191600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 41622344-41632343 Glycine max
Glyma.09G191600 10.0kb downstream 10.0kb downstream 18562 true Chr09: 41632344-41650905 Glycine max
Glyma.09G191600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 41640906-41650905 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307054 5265 Fabidae View MSA
124069206 5270 Rosid View MSA
123746618 5271 Pentapetalae View MSA
122795390 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.0375 0.0 6.35467    
cufflinks 2.064 0.0 6.42288    
cufflinks 2.51112 0.0 7.60512   High
cufflinks 1.53216 0.0 4.96652   Low
cufflinks 1.57055 0.0 5.07415    
cufflinks 2.14222 0.0 6.62734    
cufflinks 2.01847 0.0 6.30884    
cufflinks 1.45562 0.0 4.75667   Low
cufflinks 1.81229 0.0 5.74298    
cufflinks 0.39       Low
cufflinks 0.844        
cufflinks 0.82        
cufflinks 0.438       Low
cufflinks 0.482       Low
cufflinks 0.805        
cufflinks 0.588        
cufflinks 0.625        
cufflinks 0.701        
cufflinks 0.814        
cufflinks 0.52        
cufflinks 0.846        
cufflinks 0.645        
cufflinks 0.839        
cufflinks 1.193       High
cufflinks 0.623        
cufflinks 0.627        

0 Strain