Gene : Glyma.09G193900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31413:SF2 - AFP HOMOLOG 2 Genomic Order:  1939
Name:  ? Glyma.09G193900 Secondary Identifier:  ? PAC:30483762
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G193900 0.5kb upstream 0.5kb upstream 3842 true Chr09: 41840124-41843965 Glycine max
Glyma.09G193900 0.5kb upstream 0.5kb upstream 500 false Chr09: 41840124-41840623 Glycine max
Glyma.09G193900 0.5kb downstream 0.5kb downstream 3842 true Chr09: 41840624-41844465 Glycine max
Glyma.09G193900 0.5kb downstream 0.5kb downstream 500 false Chr09: 41843966-41844465 Glycine max
Glyma.09G193900 1.0kb upstream 1.0kb upstream 4342 true Chr09: 41839624-41843965 Glycine max
Glyma.09G193900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 41839624-41840623 Glycine max
Glyma.09G193900 1.0kb downstream 1.0kb downstream 4342 true Chr09: 41840624-41844965 Glycine max
Glyma.09G193900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 41843966-41844965 Glycine max
Glyma.09G193900 2.0kb upstream 2.0kb upstream 5342 true Chr09: 41838624-41843965 Glycine max
Glyma.09G193900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 41838624-41840623 Glycine max
Glyma.09G193900 2.0kb downstream 2.0kb downstream 5342 true Chr09: 41840624-41845965 Glycine max
Glyma.09G193900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 41843966-41845965 Glycine max
Glyma.09G193900 5.0kb upstream 5.0kb upstream 8342 true Chr09: 41835624-41843965 Glycine max
Glyma.09G193900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 41835624-41840623 Glycine max
Glyma.09G193900 5.0kb downstream 5.0kb downstream 8342 true Chr09: 41840624-41848965 Glycine max
Glyma.09G193900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 41843966-41848965 Glycine max
Glyma.09G193900 10.0kb upstream 10.0kb upstream 13342 true Chr09: 41830624-41843965 Glycine max
Glyma.09G193900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 41830624-41840623 Glycine max
Glyma.09G193900 10.0kb downstream 10.0kb downstream 13342 true Chr09: 41840624-41853965 Glycine max
Glyma.09G193900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 41843966-41853965 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302818 5265 Fabidae View MSA
124067449 5270 Rosid View MSA
123751299 5271 Pentapetalae View MSA
122788952 5272 Eudicot View MSA
122043015 5273 Angiosperm View MSA
121310063 5274 Embryophyte View MSA
123347659 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.9867 0.0 105.09 High  
cufflinks 17.419 0.0 68.144   Low
cufflinks 25.324 0.0 103.032 High  
cufflinks 17.6653 0.0 75.3799   Low
cufflinks 34.7546 0.0 151.677 High High
cufflinks 35.6276 0.0 158.632 High High
cufflinks 19.0581 0.0 81.9324    
cufflinks 25.9405 0.0 115.83 High  
cufflinks 32.0309 0.0 137.698 High  
cufflinks 4.492        
cufflinks 25.838     High High
cufflinks 4.581        
cufflinks 8.871     High  
cufflinks 9.696     High  
cufflinks 22.505     High High
cufflinks 6.257        
cufflinks 4.001       Low
cufflinks 4.116       Low
cufflinks 4.693        
cufflinks 6.718        
cufflinks 15.775     High High
cufflinks 6.138        
cufflinks 4.441        
cufflinks 20.942     High High
cufflinks 6.789        
cufflinks 10.314     High  

0 Strain