Gene : Glyma.09G179500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10682:SF10 - FI03258P Genomic Order:  1795
Name:  ? Glyma.09G179500 Secondary Identifier:  ? PAC:30484602
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G179500 0.5kb upstream 0.5kb upstream 7182 true Chr09: 40419904-40427085 Glycine max
Glyma.09G179500 0.5kb upstream 0.5kb upstream 500 false Chr09: 40419904-40420403 Glycine max
Glyma.09G179500 0.5kb downstream 0.5kb downstream 7182 true Chr09: 40420404-40427585 Glycine max
Glyma.09G179500 0.5kb downstream 0.5kb downstream 500 false Chr09: 40427086-40427585 Glycine max
Glyma.09G179500 1.0kb upstream 1.0kb upstream 7682 true Chr09: 40419404-40427085 Glycine max
Glyma.09G179500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 40419404-40420403 Glycine max
Glyma.09G179500 1.0kb downstream 1.0kb downstream 7682 true Chr09: 40420404-40428085 Glycine max
Glyma.09G179500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 40427086-40428085 Glycine max
Glyma.09G179500 2.0kb upstream 2.0kb upstream 8682 true Chr09: 40418404-40427085 Glycine max
Glyma.09G179500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 40418404-40420403 Glycine max
Glyma.09G179500 2.0kb downstream 2.0kb downstream 8682 true Chr09: 40420404-40429085 Glycine max
Glyma.09G179500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 40427086-40429085 Glycine max
Glyma.09G179500 5.0kb upstream 5.0kb upstream 11682 true Chr09: 40415404-40427085 Glycine max
Glyma.09G179500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 40415404-40420403 Glycine max
Glyma.09G179500 5.0kb downstream 5.0kb downstream 11682 true Chr09: 40420404-40432085 Glycine max
Glyma.09G179500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 40427086-40432085 Glycine max
Glyma.09G179500 10.0kb upstream 10.0kb upstream 16682 true Chr09: 40410404-40427085 Glycine max
Glyma.09G179500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 40410404-40420403 Glycine max
Glyma.09G179500 10.0kb downstream 10.0kb downstream 16682 true Chr09: 40420404-40437085 Glycine max
Glyma.09G179500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 40427086-40437085 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311192 5265 Fabidae View MSA
124068405 5270 Rosid View MSA
123750004 5271 Pentapetalae View MSA
122790676 5272 Eudicot View MSA
122041871 5273 Angiosperm View MSA
123429108 5275 Viridiplantae View MSA
121348362 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.67008 0.0 25.8089    
cufflinks 9.64573 0.0 25.7421    
cufflinks 13.6088 0.0 36.4798   High
cufflinks 11.3013 0.0 30.1623    
cufflinks 7.72145 0.0 20.7071   Low
cufflinks 8.75078 0.0 23.3843    
cufflinks 12.0035 0.0 32.0452   High
cufflinks 10.1954 0.0 27.2005    
cufflinks 7.79061 0.0 20.8764   Low
cufflinks 4.815        
cufflinks 4.232        
cufflinks 7.529     High High
cufflinks 4.539        
cufflinks 3.451       Low
cufflinks 3.726       Low
cufflinks 4.749        
cufflinks 4.404        
cufflinks 7.121       High
cufflinks 6.248       High
cufflinks 5.157        
cufflinks 3.909       Low
cufflinks 5.561        
cufflinks 4.882        
cufflinks 4.653        
cufflinks 4.655        
cufflinks 4.999        

0 Strain