Gene : Glyma.09G180400 G. max Wm82.a2.v1
Genomic Order:  1804 Name:  ? Glyma.09G180400
Secondary Identifier:  ? PAC:30485753
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G180400 0.5kb upstream 0.5kb upstream 3422 true Chr09: 40548350-40551771 Glycine max
Glyma.09G180400 0.5kb upstream 0.5kb upstream 500 false Chr09: 40548350-40548849 Glycine max
Glyma.09G180400 0.5kb downstream 0.5kb downstream 3422 true Chr09: 40548850-40552271 Glycine max
Glyma.09G180400 0.5kb downstream 0.5kb downstream 500 false Chr09: 40551772-40552271 Glycine max
Glyma.09G180400 1.0kb upstream 1.0kb upstream 3922 true Chr09: 40547850-40551771 Glycine max
Glyma.09G180400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 40547850-40548849 Glycine max
Glyma.09G180400 1.0kb downstream 1.0kb downstream 3922 true Chr09: 40548850-40552771 Glycine max
Glyma.09G180400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 40551772-40552771 Glycine max
Glyma.09G180400 2.0kb upstream 2.0kb upstream 4922 true Chr09: 40546850-40551771 Glycine max
Glyma.09G180400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 40546850-40548849 Glycine max
Glyma.09G180400 2.0kb downstream 2.0kb downstream 4922 true Chr09: 40548850-40553771 Glycine max
Glyma.09G180400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 40551772-40553771 Glycine max
Glyma.09G180400 5.0kb upstream 5.0kb upstream 7922 true Chr09: 40543850-40551771 Glycine max
Glyma.09G180400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 40543850-40548849 Glycine max
Glyma.09G180400 5.0kb downstream 5.0kb downstream 7922 true Chr09: 40548850-40556771 Glycine max
Glyma.09G180400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 40551772-40556771 Glycine max
Glyma.09G180400 10.0kb upstream 10.0kb upstream 12922 true Chr09: 40538850-40551771 Glycine max
Glyma.09G180400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 40538850-40548849 Glycine max
Glyma.09G180400 10.0kb downstream 10.0kb downstream 12922 true Chr09: 40548850-40561771 Glycine max
Glyma.09G180400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 40551772-40561771 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791746 5273 Angiosperm View MSA
122307810 5265 Fabidae View MSA
124050974 5270 Rosid View MSA
123751093 5271 Pentapetalae View MSA
122789042 5272 Eudicot View MSA
121063045 5274 Embryophyte View MSA
123102831 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3723 0.0 43.9686   High
cufflinks 6.0432 0.0 19.0216    
cufflinks 4.53279 0.0 20.3715    
cufflinks 4.73873 0.0 24.4995    
cufflinks 6.10513 0.0 29.0413    
cufflinks 4.04126 0.0 19.0649   Low
cufflinks 10.8522 0.0 38.3526   High
cufflinks 4.67997 0.0 16.08    
cufflinks 6.70889 0.0 26.6857    
cufflinks 0.325       Low
cufflinks 1.076        
cufflinks 0.898        
cufflinks 0.93        
cufflinks 1.364       High
cufflinks 1.047        
cufflinks 0.539        
cufflinks 0.716        
cufflinks 0.727        
cufflinks 0.677        
cufflinks 0.539        
cufflinks 0.871        
cufflinks 0.59        
cufflinks 0.787        
cufflinks 1.477       High
cufflinks 0.566        
cufflinks 0.655        

0 Strain