Gene : Glyma.09G180800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10994:SF81 - RETICULON-LIKE PROTEIN B15 Genomic Order:  1808
Name:  ? Glyma.09G180800 Secondary Identifier:  ? PAC:30484139
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G180800 0.5kb upstream 0.5kb upstream 5034 true Chr09: 40574739-40579772 Glycine max
Glyma.09G180800 0.5kb upstream 0.5kb upstream 500 false Chr09: 40579273-40579772 Glycine max
Glyma.09G180800 0.5kb downstream 0.5kb downstream 5034 true Chr09: 40574239-40579272 Glycine max
Glyma.09G180800 0.5kb downstream 0.5kb downstream 500 false Chr09: 40574239-40574738 Glycine max
Glyma.09G180800 1.0kb upstream 1.0kb upstream 5534 true Chr09: 40574739-40580272 Glycine max
Glyma.09G180800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 40579273-40580272 Glycine max
Glyma.09G180800 1.0kb downstream 1.0kb downstream 5534 true Chr09: 40573739-40579272 Glycine max
Glyma.09G180800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 40573739-40574738 Glycine max
Glyma.09G180800 2.0kb upstream 2.0kb upstream 6534 true Chr09: 40574739-40581272 Glycine max
Glyma.09G180800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 40579273-40581272 Glycine max
Glyma.09G180800 2.0kb downstream 2.0kb downstream 6534 true Chr09: 40572739-40579272 Glycine max
Glyma.09G180800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 40572739-40574738 Glycine max
Glyma.09G180800 5.0kb upstream 5.0kb upstream 9534 true Chr09: 40574739-40584272 Glycine max
Glyma.09G180800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 40579273-40584272 Glycine max
Glyma.09G180800 5.0kb downstream 5.0kb downstream 9534 true Chr09: 40569739-40579272 Glycine max
Glyma.09G180800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 40569739-40574738 Glycine max
Glyma.09G180800 10.0kb upstream 10.0kb upstream 14534 true Chr09: 40574739-40589272 Glycine max
Glyma.09G180800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 40579273-40589272 Glycine max
Glyma.09G180800 10.0kb downstream 10.0kb downstream 14534 true Chr09: 40564739-40579272 Glycine max
Glyma.09G180800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 40564739-40574738 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311884 5265 Fabidae View MSA
124065232 5270 Rosid View MSA
123744600 5271 Pentapetalae View MSA
122788689 5272 Eudicot View MSA
122048457 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.466447 0.0 1.74959    
cufflinks 1.13569 0.0 4.04201    
cufflinks 2.36037 0.0 7.76515    
cufflinks 1.49299 0.0 5.19424    
cufflinks 1.65019 0.0 5.71841    
cufflinks 1.09078 0.0 3.89772    
cufflinks 0.154202 0.0 0.606844 Low Low
cufflinks 4.63633 0.0 14.0018   High
cufflinks 3.77906 0.0 11.7347   High
cufflinks 6.469       High
cufflinks 1.031        
cufflinks 1.064        
cufflinks 1.585        
cufflinks 0.389        
cufflinks 0.091       Low
cufflinks 0.869        
cufflinks 1.009        
cufflinks 1.911        
cufflinks 0.332       Low
cufflinks 1.058        
cufflinks 1.265        
cufflinks 0.943        
cufflinks 0.575        
cufflinks 0.649        
cufflinks 1.133        
cufflinks 1.244        

0 Strain