Gene : Glyma.09G183500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12565:SF94 - TRANSCRIPTION FACTOR BEE 3 Genomic Order:  1835
Name:  ? Glyma.09G183500 Secondary Identifier:  ? PAC:30486742
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G183500 0.5kb upstream 0.5kb upstream 2414 true Chr09: 40859872-40862285 Glycine max
Glyma.09G183500 0.5kb upstream 0.5kb upstream 500 false Chr09: 40859872-40860371 Glycine max
Glyma.09G183500 0.5kb downstream 0.5kb downstream 2414 true Chr09: 40860372-40862785 Glycine max
Glyma.09G183500 0.5kb downstream 0.5kb downstream 500 false Chr09: 40862286-40862785 Glycine max
Glyma.09G183500 1.0kb upstream 1.0kb upstream 2914 true Chr09: 40859372-40862285 Glycine max
Glyma.09G183500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 40859372-40860371 Glycine max
Glyma.09G183500 1.0kb downstream 1.0kb downstream 2914 true Chr09: 40860372-40863285 Glycine max
Glyma.09G183500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 40862286-40863285 Glycine max
Glyma.09G183500 2.0kb upstream 2.0kb upstream 3914 true Chr09: 40858372-40862285 Glycine max
Glyma.09G183500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 40858372-40860371 Glycine max
Glyma.09G183500 2.0kb downstream 2.0kb downstream 3914 true Chr09: 40860372-40864285 Glycine max
Glyma.09G183500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 40862286-40864285 Glycine max
Glyma.09G183500 5.0kb upstream 5.0kb upstream 6914 true Chr09: 40855372-40862285 Glycine max
Glyma.09G183500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 40855372-40860371 Glycine max
Glyma.09G183500 5.0kb downstream 5.0kb downstream 6914 true Chr09: 40860372-40867285 Glycine max
Glyma.09G183500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 40862286-40867285 Glycine max
Glyma.09G183500 10.0kb upstream 10.0kb upstream 11914 true Chr09: 40850372-40862285 Glycine max
Glyma.09G183500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 40850372-40860371 Glycine max
Glyma.09G183500 10.0kb downstream 10.0kb downstream 11914 true Chr09: 40860372-40872285 Glycine max
Glyma.09G183500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 40862286-40872285 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306654 5265 Fabidae View MSA
124071810 5270 Rosid View MSA
123752440 5271 Pentapetalae View MSA
122788627 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.948503 0.0 3.4589    
cufflinks 0.375695 0.0 1.43212    
cufflinks 2.02676 0.0 6.93286   High
cufflinks 0.0103677 0.0 0.0494264 Low Low
cufflinks 1.27269 0.0 4.55581    
cufflinks 0.5629 0.0 2.10969    
cufflinks 0.0488481 0.0 0.20397 Low Low
cufflinks 0.218927 0.0 0.852698 Low  
cufflinks 0.430224 0.0 1.63003    
cufflinks 0.137        
cufflinks 0.049     Low  
cufflinks 1.078       High
cufflinks 2.06       High
cufflinks 0.345        
cufflinks 0.02     Low Low
cufflinks 0.145        
cufflinks 0.072        
cufflinks 1.512       High
cufflinks 0.144        
cufflinks 0.056     Low  
cufflinks 0.251        
cufflinks 0.152        
cufflinks 0.065     Low  
cufflinks 0.061        
cufflinks 0.103        
cufflinks 0.179        

0 Strain