Gene : Glyma.09G231600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945:SF152 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL12 Genomic Order:  2316
Name:  ? Glyma.09G231600 Secondary Identifier:  ? PAC:30484341
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G231600 0.5kb upstream 0.5kb upstream 4458 true Chr09: 45484756-45489213 Glycine max
Glyma.09G231600 0.5kb upstream 0.5kb upstream 500 false Chr09: 45484756-45485255 Glycine max
Glyma.09G231600 0.5kb downstream 0.5kb downstream 4458 true Chr09: 45485256-45489713 Glycine max
Glyma.09G231600 0.5kb downstream 0.5kb downstream 500 false Chr09: 45489214-45489713 Glycine max
Glyma.09G231600 1.0kb upstream 1.0kb upstream 4958 true Chr09: 45484256-45489213 Glycine max
Glyma.09G231600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45484256-45485255 Glycine max
Glyma.09G231600 1.0kb downstream 1.0kb downstream 4958 true Chr09: 45485256-45490213 Glycine max
Glyma.09G231600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45489214-45490213 Glycine max
Glyma.09G231600 2.0kb upstream 2.0kb upstream 5958 true Chr09: 45483256-45489213 Glycine max
Glyma.09G231600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45483256-45485255 Glycine max
Glyma.09G231600 2.0kb downstream 2.0kb downstream 5958 true Chr09: 45485256-45491213 Glycine max
Glyma.09G231600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45489214-45491213 Glycine max
Glyma.09G231600 5.0kb upstream 5.0kb upstream 8958 true Chr09: 45480256-45489213 Glycine max
Glyma.09G231600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45480256-45485255 Glycine max
Glyma.09G231600 5.0kb downstream 5.0kb downstream 8958 true Chr09: 45485256-45494213 Glycine max
Glyma.09G231600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45489214-45494213 Glycine max
Glyma.09G231600 10.0kb upstream 10.0kb upstream 13958 true Chr09: 45475256-45489213 Glycine max
Glyma.09G231600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45475256-45485255 Glycine max
Glyma.09G231600 10.0kb downstream 10.0kb downstream 13958 true Chr09: 45485256-45499213 Glycine max
Glyma.09G231600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45489214-45499213 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026526 5273 Angiosperm View MSA
122305459 5265 Fabidae View MSA
124065817 5270 Rosid View MSA
123738815 5271 Pentapetalae View MSA
122789214 5272 Eudicot View MSA
121296369 5274 Embryophyte View MSA
123334545 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0207422 0.0 0.107178 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0425528 0.0 0.196869 Low  
cufflinks 0.13216 0.0 0.530211 Low  
cufflinks 3.91988 0.0 17.7923   High
cufflinks 0.841533 0.0 4.02726    
cufflinks 0.0360955 0.0 0.164045 Low  
cufflinks 3.34893 0.0 16.618    
cufflinks 5.93439 0.0 34.9836   High
cufflinks 0.121        
cufflinks 0.326        
cufflinks 0.003     Low Low
cufflinks 0.609        
cufflinks 0.415        
cufflinks 0.169        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.749       High
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.711        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.523        
cufflinks 0.001     Low Low
cufflinks 0.902        

0 Strain