Gene : Glyma.09G233500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15856//PTHR15856:SF28 - PHD FINGER PROTEIN 20-RELATED Genomic Order:  2335
Name:  ? Glyma.09G233500 Secondary Identifier:  ? PAC:30484867
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G233500 0.5kb upstream 0.5kb upstream 4166 true Chr09: 45614498-45618663 Glycine max
Glyma.09G233500 0.5kb upstream 0.5kb upstream 500 false Chr09: 45614498-45614997 Glycine max
Glyma.09G233500 0.5kb downstream 0.5kb downstream 4166 true Chr09: 45614998-45619163 Glycine max
Glyma.09G233500 0.5kb downstream 0.5kb downstream 500 false Chr09: 45618664-45619163 Glycine max
Glyma.09G233500 1.0kb upstream 1.0kb upstream 4666 true Chr09: 45613998-45618663 Glycine max
Glyma.09G233500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45613998-45614997 Glycine max
Glyma.09G233500 1.0kb downstream 1.0kb downstream 4666 true Chr09: 45614998-45619663 Glycine max
Glyma.09G233500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45618664-45619663 Glycine max
Glyma.09G233500 2.0kb upstream 2.0kb upstream 5666 true Chr09: 45612998-45618663 Glycine max
Glyma.09G233500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45612998-45614997 Glycine max
Glyma.09G233500 2.0kb downstream 2.0kb downstream 5666 true Chr09: 45614998-45620663 Glycine max
Glyma.09G233500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45618664-45620663 Glycine max
Glyma.09G233500 5.0kb upstream 5.0kb upstream 8666 true Chr09: 45609998-45618663 Glycine max
Glyma.09G233500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45609998-45614997 Glycine max
Glyma.09G233500 5.0kb downstream 5.0kb downstream 8666 true Chr09: 45614998-45623663 Glycine max
Glyma.09G233500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45618664-45623663 Glycine max
Glyma.09G233500 10.0kb upstream 10.0kb upstream 13666 true Chr09: 45604998-45618663 Glycine max
Glyma.09G233500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45604998-45614997 Glycine max
Glyma.09G233500 10.0kb downstream 10.0kb downstream 13666 true Chr09: 45614998-45628663 Glycine max
Glyma.09G233500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45618664-45628663 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306057 5265 Fabidae View MSA
124069901 5270 Rosid View MSA
123741706 5271 Pentapetalae View MSA
122793317 5272 Eudicot View MSA
122047427 5273 Angiosperm View MSA
121310739 5274 Embryophyte View MSA
123348151 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.71541 0.0 20.6072    
cufflinks 13.0243 0.0 39.0009   High
cufflinks 6.66328 0.0 23.68    
cufflinks 8.93264 0.0 26.7974    
cufflinks 8.57355 0.0 29.8127    
cufflinks 3.76128 0.0 12.5387   Low
cufflinks 10.9792 0.0 32.6396   High
cufflinks 6.69018 0.0 20.4372    
cufflinks 6.62656 0.0 23.4246    
cufflinks 1.695        
cufflinks 0.776       Low
cufflinks 3.735        
cufflinks 1.41        
cufflinks 1.898        
cufflinks 16.27     High High
cufflinks 2.812        
cufflinks 0.695       Low
cufflinks 4.161        
cufflinks 6.079       High
cufflinks 2.415        
cufflinks 0.968        
cufflinks 2.458        
cufflinks 3.9        
cufflinks 0.8       Low
cufflinks 2.44        
cufflinks 0.699       Low

0 Strain