Gene : Glyma.09G226400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13923:SF11 - SEC31, ISOFORM B Genomic Order:  2264
Name:  ? Glyma.09G226400 Secondary Identifier:  ? PAC:30486428
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G226400 0.5kb upstream 0.5kb upstream 11252 true Chr09: 45121126-45132377 Glycine max
Glyma.09G226400 0.5kb upstream 0.5kb upstream 500 false Chr09: 45131878-45132377 Glycine max
Glyma.09G226400 0.5kb downstream 0.5kb downstream 11252 true Chr09: 45120626-45131877 Glycine max
Glyma.09G226400 0.5kb downstream 0.5kb downstream 500 false Chr09: 45120626-45121125 Glycine max
Glyma.09G226400 1.0kb upstream 1.0kb upstream 11752 true Chr09: 45121126-45132877 Glycine max
Glyma.09G226400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45131878-45132877 Glycine max
Glyma.09G226400 1.0kb downstream 1.0kb downstream 11752 true Chr09: 45120126-45131877 Glycine max
Glyma.09G226400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45120126-45121125 Glycine max
Glyma.09G226400 2.0kb upstream 2.0kb upstream 12752 true Chr09: 45121126-45133877 Glycine max
Glyma.09G226400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45131878-45133877 Glycine max
Glyma.09G226400 2.0kb downstream 2.0kb downstream 12752 true Chr09: 45119126-45131877 Glycine max
Glyma.09G226400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45119126-45121125 Glycine max
Glyma.09G226400 5.0kb upstream 5.0kb upstream 15752 true Chr09: 45121126-45136877 Glycine max
Glyma.09G226400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45131878-45136877 Glycine max
Glyma.09G226400 5.0kb downstream 5.0kb downstream 15752 true Chr09: 45116126-45131877 Glycine max
Glyma.09G226400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45116126-45121125 Glycine max
Glyma.09G226400 10.0kb upstream 10.0kb upstream 20752 true Chr09: 45121126-45141877 Glycine max
Glyma.09G226400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45131878-45141877 Glycine max
Glyma.09G226400 10.0kb downstream 10.0kb downstream 20752 true Chr09: 45111126-45131877 Glycine max
Glyma.09G226400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45111126-45121125 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029056 5273 Angiosperm View MSA
122300470 5265 Fabidae View MSA
124062356 5270 Rosid View MSA
123747361 5271 Pentapetalae View MSA
122791876 5272 Eudicot View MSA
121344337 5274 Embryophyte View MSA
123426068 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.3677 0.0 84.6578    
cufflinks 15.3317 0.0 55.8818    
cufflinks 15.5954 0.0 58.1977    
cufflinks 28.2456 0.0 120.672 High High
cufflinks 28.7394 0.0 122.723 High High
cufflinks 12.4083 0.0 43.8151   Low
cufflinks 25.4055 0.0 104.304 High  
cufflinks 23.4082 0.0 94.5385 High  
cufflinks 18.1218 0.0 68.1778    
cufflinks 5.92       High
cufflinks 1.993       Low
cufflinks 3.664        
cufflinks 6.346       High
cufflinks 8.491     High High
cufflinks 2.723        
cufflinks 3.649        
cufflinks 3.263        
cufflinks 5.248        
cufflinks 5.175        
cufflinks 3.129        
cufflinks 3.017        
cufflinks 3.578        
cufflinks 4.18        
cufflinks 2.743        
cufflinks 3.251        
cufflinks 3.138        

0 Strain