Gene : Glyma.09G227200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23105:SF5 - 39S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL Genomic Order:  2272
Name:  ? Glyma.09G227200 Secondary Identifier:  ? PAC:30482898
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G227200 0.5kb upstream 0.5kb upstream 5818 true Chr09: 45169710-45175527 Glycine max
Glyma.09G227200 0.5kb upstream 0.5kb upstream 500 false Chr09: 45169710-45170209 Glycine max
Glyma.09G227200 0.5kb downstream 0.5kb downstream 5818 true Chr09: 45170210-45176027 Glycine max
Glyma.09G227200 0.5kb downstream 0.5kb downstream 500 false Chr09: 45175528-45176027 Glycine max
Glyma.09G227200 1.0kb upstream 1.0kb upstream 6318 true Chr09: 45169210-45175527 Glycine max
Glyma.09G227200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45169210-45170209 Glycine max
Glyma.09G227200 1.0kb downstream 1.0kb downstream 6318 true Chr09: 45170210-45176527 Glycine max
Glyma.09G227200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45175528-45176527 Glycine max
Glyma.09G227200 2.0kb upstream 2.0kb upstream 7318 true Chr09: 45168210-45175527 Glycine max
Glyma.09G227200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45168210-45170209 Glycine max
Glyma.09G227200 2.0kb downstream 2.0kb downstream 7318 true Chr09: 45170210-45177527 Glycine max
Glyma.09G227200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45175528-45177527 Glycine max
Glyma.09G227200 5.0kb upstream 5.0kb upstream 10318 true Chr09: 45165210-45175527 Glycine max
Glyma.09G227200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45165210-45170209 Glycine max
Glyma.09G227200 5.0kb downstream 5.0kb downstream 10318 true Chr09: 45170210-45180527 Glycine max
Glyma.09G227200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45175528-45180527 Glycine max
Glyma.09G227200 10.0kb upstream 10.0kb upstream 15318 true Chr09: 45160210-45175527 Glycine max
Glyma.09G227200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45160210-45170209 Glycine max
Glyma.09G227200 10.0kb downstream 10.0kb downstream 15318 true Chr09: 45170210-45185527 Glycine max
Glyma.09G227200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45175528-45185527 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299154 5265 Fabidae View MSA
124061690 5270 Rosid View MSA
123738207 5271 Pentapetalae View MSA
122788620 5272 Eudicot View MSA
122046833 5273 Angiosperm View MSA
121346612 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 120.069 0.0 390.231 High High
cufflinks 45.3203 0.0 126.765 High  
cufflinks 19.4621 0.0 51.9507    
cufflinks 32.2881 0.0 87.8201 High  
cufflinks 17.9432 0.0 47.8703    
cufflinks 14.5984 0.0 39.0194    
cufflinks 26.6757 0.0 71.7421 High  
cufflinks 23.1028 0.0 61.8958 High  
cufflinks 8.87718 0.0 24.2466   Low
cufflinks 9.295     High  
cufflinks 1.418       Low
cufflinks 6.797        
cufflinks 2.998        
cufflinks 2.895        
cufflinks 1.478       Low
cufflinks 46.435     High High
cufflinks 1.405       Low
cufflinks 5.494        
cufflinks 12.848     High  
cufflinks 44.345     High High
cufflinks 1.345       Low
cufflinks 43.422     High High
cufflinks 39.314     High High
cufflinks 1.573        
cufflinks 44.782     High High
cufflinks 1.359       Low

0 Strain