Gene : Glyma.09G227400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11586:SF18 - NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN Genomic Order:  2274
Name:  ? Glyma.09G227400 Secondary Identifier:  ? PAC:30486952
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G227400 0.5kb upstream 0.5kb upstream 4095 true Chr09: 45181900-45185994 Glycine max
Glyma.09G227400 0.5kb upstream 0.5kb upstream 500 false Chr09: 45181900-45182399 Glycine max
Glyma.09G227400 0.5kb downstream 0.5kb downstream 4095 true Chr09: 45182400-45186494 Glycine max
Glyma.09G227400 0.5kb downstream 0.5kb downstream 500 false Chr09: 45185995-45186494 Glycine max
Glyma.09G227400 1.0kb upstream 1.0kb upstream 4595 true Chr09: 45181400-45185994 Glycine max
Glyma.09G227400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45181400-45182399 Glycine max
Glyma.09G227400 1.0kb downstream 1.0kb downstream 4595 true Chr09: 45182400-45186994 Glycine max
Glyma.09G227400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45185995-45186994 Glycine max
Glyma.09G227400 2.0kb upstream 2.0kb upstream 5595 true Chr09: 45180400-45185994 Glycine max
Glyma.09G227400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45180400-45182399 Glycine max
Glyma.09G227400 2.0kb downstream 2.0kb downstream 5595 true Chr09: 45182400-45187994 Glycine max
Glyma.09G227400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45185995-45187994 Glycine max
Glyma.09G227400 5.0kb upstream 5.0kb upstream 8595 true Chr09: 45177400-45185994 Glycine max
Glyma.09G227400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45177400-45182399 Glycine max
Glyma.09G227400 5.0kb downstream 5.0kb downstream 8595 true Chr09: 45182400-45190994 Glycine max
Glyma.09G227400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45185995-45190994 Glycine max
Glyma.09G227400 10.0kb upstream 10.0kb upstream 13595 true Chr09: 45172400-45185994 Glycine max
Glyma.09G227400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45172400-45182399 Glycine max
Glyma.09G227400 10.0kb downstream 10.0kb downstream 13595 true Chr09: 45182400-45195994 Glycine max
Glyma.09G227400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45185995-45195994 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300832 5265 Fabidae View MSA
124064095 5270 Rosid View MSA
123736629 5271 Pentapetalae View MSA
122792707 5272 Eudicot View MSA
122045155 5273 Angiosperm View MSA
121346605 5274 Embryophyte View MSA
123427531 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.34666 0.0 22.4082   High
cufflinks 3.56671 0.0 11.921    
cufflinks 1.29723 0.0 24.2165   Low
cufflinks 2.66358 0.0 10.6902    
cufflinks 2.88589 0.0 12.1345    
cufflinks 1.78633 0.0 9.4275    
cufflinks 2.45777 0.0 9.86947    
cufflinks 2.60305 0.0 12.4983    
cufflinks 2.32926 0.0 13.1905    
cufflinks 2.23        
cufflinks 0.2       Low
cufflinks 1.316        
cufflinks 2.0        
cufflinks 2.759        
cufflinks 0.437        
cufflinks 4.907       High
cufflinks 0.344       Low
cufflinks 1.151        
cufflinks 1.97        
cufflinks 4.157        
cufflinks 0.234       Low
cufflinks 4.209        
cufflinks 5.506       High
cufflinks 0.181       Low
cufflinks 4.806       High
cufflinks 0.431        

0 Strain