Gene : Glyma.09G222400 G. max Wm82.a2.v1

Defline:  (1 of 2) PTHR10762:SF1 - DIPHTHAMIDE BIOSYNTHESIS PROTEIN 1 Genomic Order:  2224
Name:  ? Glyma.09G222400 Secondary Identifier:  ? PAC:30486098

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G222400 0.5kb upstream 0.5kb upstream 2688 true Chr09: 44321471-44324158 Glycine max
Glyma.09G222400 0.5kb upstream 0.5kb upstream 500 false Chr09: 44323659-44324158 Glycine max
Glyma.09G222400 0.5kb downstream 0.5kb downstream 2688 true Chr09: 44320971-44323658 Glycine max
Glyma.09G222400 0.5kb downstream 0.5kb downstream 500 false Chr09: 44320971-44321470 Glycine max
Glyma.09G222400 1.0kb upstream 1.0kb upstream 3188 true Chr09: 44321471-44324658 Glycine max
Glyma.09G222400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 44323659-44324658 Glycine max
Glyma.09G222400 1.0kb downstream 1.0kb downstream 3188 true Chr09: 44320471-44323658 Glycine max
Glyma.09G222400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 44320471-44321470 Glycine max
Glyma.09G222400 2.0kb upstream 2.0kb upstream 4188 true Chr09: 44321471-44325658 Glycine max
Glyma.09G222400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 44323659-44325658 Glycine max
Glyma.09G222400 2.0kb downstream 2.0kb downstream 4188 true Chr09: 44319471-44323658 Glycine max
Glyma.09G222400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 44319471-44321470 Glycine max
Glyma.09G222400 5.0kb upstream 5.0kb upstream 7188 true Chr09: 44321471-44328658 Glycine max
Glyma.09G222400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 44323659-44328658 Glycine max
Glyma.09G222400 5.0kb downstream 5.0kb downstream 7188 true Chr09: 44316471-44323658 Glycine max
Glyma.09G222400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 44316471-44321470 Glycine max
Glyma.09G222400 10.0kb upstream 10.0kb upstream 12188 true Chr09: 44321471-44333658 Glycine max
Glyma.09G222400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 44323659-44333658 Glycine max
Glyma.09G222400 10.0kb downstream 10.0kb downstream 12188 true Chr09: 44311471-44323658 Glycine max
Glyma.09G222400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 44311471-44321470 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303414 5265 Fabidae View MSA
124063918 5270 Rosid View MSA
123738037 5271 Pentapetalae View MSA
122790582 5272 Eudicot View MSA
122041758 5273 Angiosperm View MSA
121347504 5274 Embryophyte View MSA
123426492 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.03805 0.0 11.6813   High
cufflinks 3.1537 0.0 9.45465    
cufflinks 3.28062 0.0 9.77421    
cufflinks 3.25941 0.0 9.7111    
cufflinks 3.42484 0.0 10.0946    
cufflinks 2.06694 0.0 6.55033   Low
cufflinks 3.64497 0.0 10.6501    
cufflinks 3.07078 0.0 9.2314    
cufflinks 2.96822 0.0 8.94282    
cufflinks 3.263        
cufflinks 3.383        
cufflinks 3.273        
cufflinks 2.434        
cufflinks 2.814        
cufflinks 2.753        
cufflinks 2.588        
cufflinks 7.655     High High
cufflinks 3.424        
cufflinks 3.611        
cufflinks 2.604        
cufflinks 2.319       Low
cufflinks 3.11        
cufflinks 3.506        
cufflinks 2.613        
cufflinks 2.518        
cufflinks 2.699        

0 Strain