Gene : Glyma.09G212200 G. max Wm82.a2.v1
Defline:  (1 of 26) PTHR16007 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  2122
Name:  ? Glyma.09G212200 Secondary Identifier:  ? PAC:30486665
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G212200 0.5kb upstream 0.5kb upstream 5100 true Chr09: 43623108-43628207 Glycine max
Glyma.09G212200 0.5kb upstream 0.5kb upstream 500 false Chr09: 43623108-43623607 Glycine max
Glyma.09G212200 0.5kb downstream 0.5kb downstream 5100 true Chr09: 43623608-43628707 Glycine max
Glyma.09G212200 0.5kb downstream 0.5kb downstream 500 false Chr09: 43628208-43628707 Glycine max
Glyma.09G212200 1.0kb upstream 1.0kb upstream 5600 true Chr09: 43622608-43628207 Glycine max
Glyma.09G212200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 43622608-43623607 Glycine max
Glyma.09G212200 1.0kb downstream 1.0kb downstream 5600 true Chr09: 43623608-43629207 Glycine max
Glyma.09G212200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 43628208-43629207 Glycine max
Glyma.09G212200 2.0kb upstream 2.0kb upstream 6600 true Chr09: 43621608-43628207 Glycine max
Glyma.09G212200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 43621608-43623607 Glycine max
Glyma.09G212200 2.0kb downstream 2.0kb downstream 6600 true Chr09: 43623608-43630207 Glycine max
Glyma.09G212200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 43628208-43630207 Glycine max
Glyma.09G212200 5.0kb upstream 5.0kb upstream 9600 true Chr09: 43618608-43628207 Glycine max
Glyma.09G212200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 43618608-43623607 Glycine max
Glyma.09G212200 5.0kb downstream 5.0kb downstream 9600 true Chr09: 43623608-43633207 Glycine max
Glyma.09G212200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 43628208-43633207 Glycine max
Glyma.09G212200 10.0kb upstream 10.0kb upstream 14600 true Chr09: 43613608-43628207 Glycine max
Glyma.09G212200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 43613608-43623607 Glycine max
Glyma.09G212200 10.0kb downstream 10.0kb downstream 14600 true Chr09: 43623608-43638207 Glycine max
Glyma.09G212200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 43628208-43638207 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299440 5265 Fabidae View MSA
124050453 5270 Rosid View MSA
123737519 5271 Pentapetalae View MSA
122787957 5272 Eudicot View MSA
122047488 5273 Angiosperm View MSA
121350277 5274 Embryophyte View MSA
123426219 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.98966 0.0 23.8799    
cufflinks 3.50729 0.0 13.4224    
cufflinks 2.13187 0.0 9.52133   Low
cufflinks 4.93032 0.0 19.9529    
cufflinks 5.96052 0.0 23.1796    
cufflinks 12.8587 0.0 43.6428   High
cufflinks 2.3226 0.0 8.08505   Low
cufflinks 3.75518 0.0 14.0711    
cufflinks 5.99618 0.0 19.7572    
cufflinks 0.789        
cufflinks 0.241       Low
cufflinks 0.648        
cufflinks 1.882       High
cufflinks 2.18       High
cufflinks 0.217       Low
cufflinks 0.331        
cufflinks 0.45        
cufflinks 0.774        
cufflinks 0.795        
cufflinks 0.309        
cufflinks 0.48        
cufflinks 0.512        
cufflinks 0.448        
cufflinks 0.661        
cufflinks 0.37        
cufflinks 0.534        

0 Strain