Gene : Glyma.09G215000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13900 - TRANSCRIPTION INITIATION FACTOR TFIID Genomic Order:  2150
Name:  ? Glyma.09G215000 Secondary Identifier:  ? PAC:30482629
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G215000 0.5kb upstream 0.5kb upstream 27188 true Chr09: 43810476-43837663 Glycine max
Glyma.09G215000 0.5kb upstream 0.5kb upstream 500 false Chr09: 43810476-43810975 Glycine max
Glyma.09G215000 0.5kb downstream 0.5kb downstream 27188 true Chr09: 43810976-43838163 Glycine max
Glyma.09G215000 0.5kb downstream 0.5kb downstream 500 false Chr09: 43837664-43838163 Glycine max
Glyma.09G215000 1.0kb upstream 1.0kb upstream 27688 true Chr09: 43809976-43837663 Glycine max
Glyma.09G215000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 43809976-43810975 Glycine max
Glyma.09G215000 1.0kb downstream 1.0kb downstream 27688 true Chr09: 43810976-43838663 Glycine max
Glyma.09G215000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 43837664-43838663 Glycine max
Glyma.09G215000 2.0kb upstream 2.0kb upstream 28688 true Chr09: 43808976-43837663 Glycine max
Glyma.09G215000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 43808976-43810975 Glycine max
Glyma.09G215000 2.0kb downstream 2.0kb downstream 28688 true Chr09: 43810976-43839663 Glycine max
Glyma.09G215000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 43837664-43839663 Glycine max
Glyma.09G215000 5.0kb upstream 5.0kb upstream 31688 true Chr09: 43805976-43837663 Glycine max
Glyma.09G215000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 43805976-43810975 Glycine max
Glyma.09G215000 5.0kb downstream 5.0kb downstream 31688 true Chr09: 43810976-43842663 Glycine max
Glyma.09G215000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 43837664-43842663 Glycine max
Glyma.09G215000 10.0kb upstream 10.0kb upstream 36688 true Chr09: 43800976-43837663 Glycine max
Glyma.09G215000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 43800976-43810975 Glycine max
Glyma.09G215000 10.0kb downstream 10.0kb downstream 36688 true Chr09: 43810976-43847663 Glycine max
Glyma.09G215000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 43837664-43847663 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302609 5265 Fabidae View MSA
124067609 5270 Rosid View MSA
123748970 5271 Pentapetalae View MSA
122794337 5272 Eudicot View MSA
122046359 5273 Angiosperm View MSA
121347140 5274 Embryophyte View MSA
123423919 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.06294 0.0 21.3943   High
cufflinks 4.15212 0.0 14.2583    
cufflinks 6.91208 0.0 24.8022   High
cufflinks 4.75787 0.0 16.5463    
cufflinks 2.73007 0.0 9.59895   Low
cufflinks 2.85776 0.0 8.62434   Low
cufflinks 4.26693 0.0 12.6691    
cufflinks 3.73965 0.0 12.9149    
cufflinks 3.969 0.0 13.6817    
cufflinks 0.615       Low
cufflinks 0.872        
cufflinks 1.244       High
cufflinks 0.574       Low
cufflinks 0.438       Low
cufflinks 1.093        
cufflinks 1.011        
cufflinks 0.476       Low
cufflinks 1.137        
cufflinks 0.974        
cufflinks 1.14        
cufflinks 0.851        
cufflinks 1.18        
cufflinks 0.901        
cufflinks 0.97        
cufflinks 1.085        
cufflinks 0.941        

0 Strain