Gene : Glyma.09G257300 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22950:SF280 - TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  2574
Name:  ? Glyma.09G257300 Secondary Identifier:  ? PAC:30483318
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G257300 0.5kb upstream 0.5kb upstream 3536 true Chr09: 47635541-47639076 Glycine max
Glyma.09G257300 0.5kb upstream 0.5kb upstream 500 false Chr09: 47638577-47639076 Glycine max
Glyma.09G257300 0.5kb downstream 0.5kb downstream 3536 true Chr09: 47635041-47638576 Glycine max
Glyma.09G257300 0.5kb downstream 0.5kb downstream 500 false Chr09: 47635041-47635540 Glycine max
Glyma.09G257300 1.0kb upstream 1.0kb upstream 4036 true Chr09: 47635541-47639576 Glycine max
Glyma.09G257300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47638577-47639576 Glycine max
Glyma.09G257300 1.0kb downstream 1.0kb downstream 4036 true Chr09: 47634541-47638576 Glycine max
Glyma.09G257300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47634541-47635540 Glycine max
Glyma.09G257300 2.0kb upstream 2.0kb upstream 5036 true Chr09: 47635541-47640576 Glycine max
Glyma.09G257300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47638577-47640576 Glycine max
Glyma.09G257300 2.0kb downstream 2.0kb downstream 5036 true Chr09: 47633541-47638576 Glycine max
Glyma.09G257300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47633541-47635540 Glycine max
Glyma.09G257300 5.0kb upstream 5.0kb upstream 8036 true Chr09: 47635541-47643576 Glycine max
Glyma.09G257300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47638577-47643576 Glycine max
Glyma.09G257300 5.0kb downstream 5.0kb downstream 8036 true Chr09: 47630541-47638576 Glycine max
Glyma.09G257300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47630541-47635540 Glycine max
Glyma.09G257300 10.0kb upstream 10.0kb upstream 13036 true Chr09: 47635541-47648576 Glycine max
Glyma.09G257300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47638577-47648576 Glycine max
Glyma.09G257300 10.0kb downstream 10.0kb downstream 13036 true Chr09: 47625541-47638576 Glycine max
Glyma.09G257300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47625541-47635540 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243261 5265 Fabidae Singleton cluster - no MSA
124075052 5270 Rosid View MSA
123745911 5271 Pentapetalae View MSA
122771696 5272 Eudicot View MSA
122050905 5273 Angiosperm View MSA
121349854 5274 Embryophyte View MSA
123381472 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00970742 0.0 0.04721 Low Low
cufflinks 0.0972182 0.0 0.90463 Low  
cufflinks 0.780443 0.0 3.94841    
cufflinks 0.11368 0.0 0.467625 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.88674 0.0 7.67264   High
cufflinks 0.26086 0.0 1.30624    
cufflinks 0.110053 0.0 0.528453 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.15       High
cufflinks 0.017     Low Low
cufflinks 0.122        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.083     Low  
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain