Gene : Glyma.09G258700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12705 - ORIGIN RECOGNITION COMPLEX SUBUNIT 5 Genomic Order:  2587
Name:  ? Glyma.09G258700 Secondary Identifier:  ? PAC:30485437
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G258700 0.5kb upstream 0.5kb upstream 4175 true Chr09: 47736339-47740513 Glycine max
Glyma.09G258700 0.5kb upstream 0.5kb upstream 500 false Chr09: 47736339-47736838 Glycine max
Glyma.09G258700 0.5kb downstream 0.5kb downstream 4175 true Chr09: 47736839-47741013 Glycine max
Glyma.09G258700 0.5kb downstream 0.5kb downstream 500 false Chr09: 47740514-47741013 Glycine max
Glyma.09G258700 1.0kb upstream 1.0kb upstream 4675 true Chr09: 47735839-47740513 Glycine max
Glyma.09G258700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47735839-47736838 Glycine max
Glyma.09G258700 1.0kb downstream 1.0kb downstream 4675 true Chr09: 47736839-47741513 Glycine max
Glyma.09G258700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47740514-47741513 Glycine max
Glyma.09G258700 2.0kb upstream 2.0kb upstream 5675 true Chr09: 47734839-47740513 Glycine max
Glyma.09G258700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47734839-47736838 Glycine max
Glyma.09G258700 2.0kb downstream 2.0kb downstream 5675 true Chr09: 47736839-47742513 Glycine max
Glyma.09G258700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47740514-47742513 Glycine max
Glyma.09G258700 5.0kb upstream 5.0kb upstream 8675 true Chr09: 47731839-47740513 Glycine max
Glyma.09G258700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47731839-47736838 Glycine max
Glyma.09G258700 5.0kb downstream 5.0kb downstream 8675 true Chr09: 47736839-47745513 Glycine max
Glyma.09G258700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47740514-47745513 Glycine max
Glyma.09G258700 10.0kb upstream 10.0kb upstream 13675 true Chr09: 47726839-47740513 Glycine max
Glyma.09G258700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47726839-47736838 Glycine max
Glyma.09G258700 10.0kb downstream 10.0kb downstream 13675 true Chr09: 47736839-47750513 Glycine max
Glyma.09G258700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47740514-47750513 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308121 5265 Fabidae View MSA
124063639 5270 Rosid View MSA
123738989 5271 Pentapetalae View MSA
122792366 5272 Eudicot View MSA
122046097 5273 Angiosperm View MSA
121344554 5274 Embryophyte View MSA
123425220 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0805969 0.0 0.614179 Low Low
cufflinks 1.20981 0.0 6.2445    
cufflinks 0.135644 0.0 0.671389 Low Low
cufflinks 0.263649 0.0 1.33822    
cufflinks 0.990333 0.0 5.60842    
cufflinks 0.84678 0.0 3.68515    
cufflinks 0.417477 0.0 3.07956    
cufflinks 0.457335 0.0 2.90339    
cufflinks 1.72232 0.0 8.26892   High
cufflinks 0.182        
cufflinks 0.026     Low Low
cufflinks 0.143        
cufflinks 0.677       High
cufflinks 0.797       High
cufflinks 0.105        
cufflinks 0.19        
cufflinks 0.048     Low Low
cufflinks 0.118        
cufflinks 0.859       High
cufflinks 0.128        
cufflinks 0.035     Low Low
cufflinks 0.174        
cufflinks 0.426       High
cufflinks 0.039     Low Low
cufflinks 0.172        
cufflinks 0.083        

0 Strain