Gene : Glyma.09G258900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11165//PTHR11165:SF61 - SKP1 Genomic Order:  2589
Name:  ? Glyma.09G258900 Secondary Identifier:  ? PAC:30485501
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G258900 0.5kb upstream 0.5kb upstream 9531 true Chr09: 47744318-47753848 Glycine max
Glyma.09G258900 0.5kb upstream 0.5kb upstream 500 false Chr09: 47744318-47744817 Glycine max
Glyma.09G258900 0.5kb downstream 0.5kb downstream 9531 true Chr09: 47744818-47754348 Glycine max
Glyma.09G258900 0.5kb downstream 0.5kb downstream 500 false Chr09: 47753849-47754348 Glycine max
Glyma.09G258900 1.0kb upstream 1.0kb upstream 10031 true Chr09: 47743818-47753848 Glycine max
Glyma.09G258900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47743818-47744817 Glycine max
Glyma.09G258900 1.0kb downstream 1.0kb downstream 10031 true Chr09: 47744818-47754848 Glycine max
Glyma.09G258900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47753849-47754848 Glycine max
Glyma.09G258900 2.0kb upstream 2.0kb upstream 11031 true Chr09: 47742818-47753848 Glycine max
Glyma.09G258900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47742818-47744817 Glycine max
Glyma.09G258900 2.0kb downstream 2.0kb downstream 11031 true Chr09: 47744818-47755848 Glycine max
Glyma.09G258900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47753849-47755848 Glycine max
Glyma.09G258900 5.0kb upstream 5.0kb upstream 14031 true Chr09: 47739818-47753848 Glycine max
Glyma.09G258900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47739818-47744817 Glycine max
Glyma.09G258900 5.0kb downstream 5.0kb downstream 14031 true Chr09: 47744818-47758848 Glycine max
Glyma.09G258900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47753849-47758848 Glycine max
Glyma.09G258900 10.0kb upstream 10.0kb upstream 19031 true Chr09: 47734818-47753848 Glycine max
Glyma.09G258900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47734818-47744817 Glycine max
Glyma.09G258900 10.0kb downstream 10.0kb downstream 19031 true Chr09: 47744818-47763848 Glycine max
Glyma.09G258900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47753849-47763848 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122312813 5265 Fabidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.37795 0.0 9.97716    
cufflinks 2.86329 0.0 10.7645   High
cufflinks 1.93853 0.0 8.42708   Low
cufflinks 2.60937 0.0 9.77229    
cufflinks 1.94663 0.0 8.306    
cufflinks 2.31021 0.0 8.84718    
cufflinks 2.38062 0.0 9.31409    
cufflinks 1.78813 0.0 7.48136   Low
cufflinks 2.32295 0.0 9.04056    
cufflinks 0.361        
cufflinks 0.543        
cufflinks 0.626        
cufflinks 0.455        
cufflinks 0.482        
cufflinks 0.568        
cufflinks 0.911        
cufflinks 0.17       Low
cufflinks 0.735        
cufflinks 0.624        
cufflinks 1.193       High
cufflinks 0.518        
cufflinks 1.056       High
cufflinks 1.11       High
cufflinks 0.442        
cufflinks 1.089       High
cufflinks 0.324       Low

0 Strain