Gene : Glyma.09G248900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23151:SF66 - BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE 1, CHLOROPLASTIC Genomic Order:  2489
Name:  ? Glyma.09G248900 Secondary Identifier:  ? PAC:30486685
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-1264 Glycine max pathologic  
Gmax PWY-4381 Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-7388 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G248900 0.5kb upstream 0.5kb upstream 5076 true Chr09: 47010532-47015607 Glycine max
Glyma.09G248900 0.5kb upstream 0.5kb upstream 500 false Chr09: 47010532-47011031 Glycine max
Glyma.09G248900 0.5kb downstream 0.5kb downstream 5076 true Chr09: 47011032-47016107 Glycine max
Glyma.09G248900 0.5kb downstream 0.5kb downstream 500 false Chr09: 47015608-47016107 Glycine max
Glyma.09G248900 1.0kb upstream 1.0kb upstream 5576 true Chr09: 47010032-47015607 Glycine max
Glyma.09G248900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47010032-47011031 Glycine max
Glyma.09G248900 1.0kb downstream 1.0kb downstream 5576 true Chr09: 47011032-47016607 Glycine max
Glyma.09G248900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47015608-47016607 Glycine max
Glyma.09G248900 2.0kb upstream 2.0kb upstream 6576 true Chr09: 47009032-47015607 Glycine max
Glyma.09G248900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47009032-47011031 Glycine max
Glyma.09G248900 2.0kb downstream 2.0kb downstream 6576 true Chr09: 47011032-47017607 Glycine max
Glyma.09G248900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47015608-47017607 Glycine max
Glyma.09G248900 5.0kb upstream 5.0kb upstream 9576 true Chr09: 47006032-47015607 Glycine max
Glyma.09G248900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47006032-47011031 Glycine max
Glyma.09G248900 5.0kb downstream 5.0kb downstream 9576 true Chr09: 47011032-47020607 Glycine max
Glyma.09G248900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47015608-47020607 Glycine max
Glyma.09G248900 10.0kb upstream 10.0kb upstream 14576 true Chr09: 47001032-47015607 Glycine max
Glyma.09G248900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47001032-47011031 Glycine max
Glyma.09G248900 10.0kb downstream 10.0kb downstream 14576 true Chr09: 47011032-47025607 Glycine max
Glyma.09G248900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47015608-47025607 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311832 5265 Fabidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.3628 0.0 62.1268   High
cufflinks 18.4116 0.0 66.6115   High
cufflinks 6.45112 0.0 28.7716   Low
cufflinks 13.6154 0.0 42.6823    
cufflinks 9.97582 0.0 40.0378    
cufflinks 4.91287 0.0 15.305   Low
cufflinks 12.5726 0.0 39.9024    
cufflinks 10.1699 0.0 33.3569    
cufflinks 8.25936 0.0 34.4275    
cufflinks 1.409        
cufflinks 0.179       Low
cufflinks 1.293        
cufflinks 1.166        
cufflinks 1.302        
cufflinks 0.36       Low
cufflinks 2.89       High
cufflinks 0.678        
cufflinks 1.429        
cufflinks 2.348        
cufflinks 2.739        
cufflinks 0.287       Low
cufflinks 2.696        
cufflinks 4.025       High
cufflinks 0.25       Low
cufflinks 2.973       High
cufflinks 0.358       Low

0 Strain