Gene : Glyma.09G250500 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR31221:SF1 - WRKY TRANSCRIPTION FACTOR 1-RELATED Genomic Order:  2505
Name:  ? Glyma.09G250500 Secondary Identifier:  ? PAC:30483443
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G250500 0.5kb upstream 0.5kb upstream 4536 true Chr09: 47121660-47126195 Glycine max
Glyma.09G250500 0.5kb upstream 0.5kb upstream 500 false Chr09: 47121660-47122159 Glycine max
Glyma.09G250500 0.5kb downstream 0.5kb downstream 4536 true Chr09: 47122160-47126695 Glycine max
Glyma.09G250500 0.5kb downstream 0.5kb downstream 500 false Chr09: 47126196-47126695 Glycine max
Glyma.09G250500 1.0kb upstream 1.0kb upstream 5036 true Chr09: 47121160-47126195 Glycine max
Glyma.09G250500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47121160-47122159 Glycine max
Glyma.09G250500 1.0kb downstream 1.0kb downstream 5036 true Chr09: 47122160-47127195 Glycine max
Glyma.09G250500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47126196-47127195 Glycine max
Glyma.09G250500 2.0kb upstream 2.0kb upstream 6036 true Chr09: 47120160-47126195 Glycine max
Glyma.09G250500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47120160-47122159 Glycine max
Glyma.09G250500 2.0kb downstream 2.0kb downstream 6036 true Chr09: 47122160-47128195 Glycine max
Glyma.09G250500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47126196-47128195 Glycine max
Glyma.09G250500 5.0kb upstream 5.0kb upstream 9036 true Chr09: 47117160-47126195 Glycine max
Glyma.09G250500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47117160-47122159 Glycine max
Glyma.09G250500 5.0kb downstream 5.0kb downstream 9036 true Chr09: 47122160-47131195 Glycine max
Glyma.09G250500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47126196-47131195 Glycine max
Glyma.09G250500 10.0kb upstream 10.0kb upstream 14036 true Chr09: 47112160-47126195 Glycine max
Glyma.09G250500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47112160-47122159 Glycine max
Glyma.09G250500 10.0kb downstream 10.0kb downstream 14036 true Chr09: 47122160-47136195 Glycine max
Glyma.09G250500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47126196-47136195 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306023 5265 Fabidae View MSA
124070973 5270 Rosid View MSA
123750949 5271 Pentapetalae View MSA
122792331 5272 Eudicot View MSA
122049483 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.221195 0.0 1.11584   Low
cufflinks 0.796846 0.0 5.57444   High
cufflinks 0.33836 0.0 2.1369    
cufflinks 0.717061 0.0 4.11565    
cufflinks 0.397592 0.0 1.8595    
cufflinks 0.396466 0.0 1.82484    
cufflinks 0.260254 0.0 1.28383   Low
cufflinks 0.978167 0.0 3.88268   High
cufflinks 0.635207 0.0 2.80396    
cufflinks 0.154        
cufflinks 0.022     Low Low
cufflinks 0.309       High
cufflinks 0.126        
cufflinks 0.071     Low  
cufflinks 0.113        
cufflinks 0.112        
cufflinks 0.148        
cufflinks 1.125       High
cufflinks 0.357       High
cufflinks 0.119        
cufflinks 0.041     Low Low
cufflinks 0.129        
cufflinks 0.071     Low  
cufflinks 0.028     Low Low
cufflinks 0.098        
cufflinks 0.084        

0 Strain