Gene : Glyma.09G251100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12608:SF4 - GDT1-LIKE PROTEIN 3 Genomic Order:  2511
Name:  ? Glyma.09G251100 Secondary Identifier:  ? PAC:30484423
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G251100 0.5kb upstream 0.5kb upstream 4150 true Chr09: 47160623-47164772 Glycine max
Glyma.09G251100 0.5kb upstream 0.5kb upstream 500 false Chr09: 47164273-47164772 Glycine max
Glyma.09G251100 0.5kb downstream 0.5kb downstream 4150 true Chr09: 47160123-47164272 Glycine max
Glyma.09G251100 0.5kb downstream 0.5kb downstream 500 false Chr09: 47160123-47160622 Glycine max
Glyma.09G251100 1.0kb upstream 1.0kb upstream 4650 true Chr09: 47160623-47165272 Glycine max
Glyma.09G251100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47164273-47165272 Glycine max
Glyma.09G251100 1.0kb downstream 1.0kb downstream 4650 true Chr09: 47159623-47164272 Glycine max
Glyma.09G251100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47159623-47160622 Glycine max
Glyma.09G251100 2.0kb upstream 2.0kb upstream 5650 true Chr09: 47160623-47166272 Glycine max
Glyma.09G251100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47164273-47166272 Glycine max
Glyma.09G251100 2.0kb downstream 2.0kb downstream 5650 true Chr09: 47158623-47164272 Glycine max
Glyma.09G251100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47158623-47160622 Glycine max
Glyma.09G251100 5.0kb upstream 5.0kb upstream 8650 true Chr09: 47160623-47169272 Glycine max
Glyma.09G251100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47164273-47169272 Glycine max
Glyma.09G251100 5.0kb downstream 5.0kb downstream 8650 true Chr09: 47155623-47164272 Glycine max
Glyma.09G251100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47155623-47160622 Glycine max
Glyma.09G251100 10.0kb upstream 10.0kb upstream 13650 true Chr09: 47160623-47174272 Glycine max
Glyma.09G251100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47164273-47174272 Glycine max
Glyma.09G251100 10.0kb downstream 10.0kb downstream 13650 true Chr09: 47150623-47164272 Glycine max
Glyma.09G251100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47150623-47160622 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300578 5265 Fabidae View MSA
124066638 5270 Rosid View MSA
123740452 5271 Pentapetalae View MSA
122788674 5272 Eudicot View MSA
122047998 5273 Angiosperm View MSA
121345967 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.8532 0.0 50.4998    
cufflinks 17.8529 0.0 47.9034    
cufflinks 16.1049 0.0 43.377   Low
cufflinks 24.0045 0.0 64.0463 High  
cufflinks 25.959 0.0 69.2651 High High
cufflinks 19.5137 0.0 52.2008    
cufflinks 21.6785 0.0 57.9049    
cufflinks 25.3895 0.0 67.738 High High
cufflinks 19.8951 0.0 53.2059 High  
cufflinks 13.835     High High
cufflinks 4.421       Low
cufflinks 4.824       Low
cufflinks 9.667     High  
cufflinks 14.05     High High
cufflinks 6.022     High  
cufflinks 7.145     High  
cufflinks 7.648     High  
cufflinks 8.509     High  
cufflinks 8.01     High  
cufflinks 5.845        
cufflinks 5.253        
cufflinks 6.41        
cufflinks 8.112     High  
cufflinks 5.882        
cufflinks 6.213        
cufflinks 5.119        

0 Strain