Gene : Glyma.09G252200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10293:SF37 - MONOTHIOL GLUTAREDOXIN-S14, CHLOROPLASTIC Genomic Order:  2522
Name:  ? Glyma.09G252200 Secondary Identifier:  ? PAC:30486124
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G252200 0.5kb upstream 0.5kb upstream 3641 true Chr09: 47249052-47252692 Glycine max
Glyma.09G252200 0.5kb upstream 0.5kb upstream 500 false Chr09: 47249052-47249551 Glycine max
Glyma.09G252200 0.5kb downstream 0.5kb downstream 3641 true Chr09: 47249552-47253192 Glycine max
Glyma.09G252200 0.5kb downstream 0.5kb downstream 500 false Chr09: 47252693-47253192 Glycine max
Glyma.09G252200 1.0kb upstream 1.0kb upstream 4141 true Chr09: 47248552-47252692 Glycine max
Glyma.09G252200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47248552-47249551 Glycine max
Glyma.09G252200 1.0kb downstream 1.0kb downstream 4141 true Chr09: 47249552-47253692 Glycine max
Glyma.09G252200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47252693-47253692 Glycine max
Glyma.09G252200 2.0kb upstream 2.0kb upstream 5141 true Chr09: 47247552-47252692 Glycine max
Glyma.09G252200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47247552-47249551 Glycine max
Glyma.09G252200 2.0kb downstream 2.0kb downstream 5141 true Chr09: 47249552-47254692 Glycine max
Glyma.09G252200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47252693-47254692 Glycine max
Glyma.09G252200 5.0kb upstream 5.0kb upstream 8141 true Chr09: 47244552-47252692 Glycine max
Glyma.09G252200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47244552-47249551 Glycine max
Glyma.09G252200 5.0kb downstream 5.0kb downstream 8141 true Chr09: 47249552-47257692 Glycine max
Glyma.09G252200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47252693-47257692 Glycine max
Glyma.09G252200 10.0kb upstream 10.0kb upstream 13141 true Chr09: 47239552-47252692 Glycine max
Glyma.09G252200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47239552-47249551 Glycine max
Glyma.09G252200 10.0kb downstream 10.0kb downstream 13141 true Chr09: 47249552-47262692 Glycine max
Glyma.09G252200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47252693-47262692 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310199 5265 Fabidae View MSA
124074597 5270 Rosid View MSA
123743063 5271 Pentapetalae View MSA
122787324 5272 Eudicot View MSA
122043030 5273 Angiosperm View MSA
121347328 5274 Embryophyte View MSA
123424474 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.2733 0.0 107.452 High High
cufflinks 21.4885 0.0 58.2772 High  
cufflinks 12.0126 0.0 34.2112    
cufflinks 14.5603 0.0 40.6809    
cufflinks 12.814 0.0 36.3347    
cufflinks 15.1498 0.0 42.1995    
cufflinks 14.8496 0.0 41.4879    
cufflinks 19.3378 0.0 52.7386    
cufflinks 11.2123 0.0 32.1865    
cufflinks 3.659        
cufflinks 1.016       Low
cufflinks 3.641        
cufflinks 3.205        
cufflinks 2.828        
cufflinks 1.437       Low
cufflinks 5.632        
cufflinks 2.074        
cufflinks 3.514        
cufflinks 5.62        
cufflinks 5.403        
cufflinks 1.165       Low
cufflinks 5.507        
cufflinks 6.709       High
cufflinks 1.557       Low
cufflinks 6.329       High
cufflinks 1.467       Low

0 Strain