Gene : Glyma.09G244900 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Genomic Order:  2449
Name:  ? Glyma.09G244900 Secondary Identifier:  ? PAC:30482873
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1269 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G244900 0.5kb upstream 0.5kb upstream 7502 true Chr09: 46714319-46721820 Glycine max
Glyma.09G244900 0.5kb upstream 0.5kb upstream 500 false Chr09: 46714319-46714818 Glycine max
Glyma.09G244900 0.5kb downstream 0.5kb downstream 7502 true Chr09: 46714819-46722320 Glycine max
Glyma.09G244900 0.5kb downstream 0.5kb downstream 500 false Chr09: 46721821-46722320 Glycine max
Glyma.09G244900 1.0kb upstream 1.0kb upstream 8002 true Chr09: 46713819-46721820 Glycine max
Glyma.09G244900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46713819-46714818 Glycine max
Glyma.09G244900 1.0kb downstream 1.0kb downstream 8002 true Chr09: 46714819-46722820 Glycine max
Glyma.09G244900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46721821-46722820 Glycine max
Glyma.09G244900 2.0kb upstream 2.0kb upstream 9002 true Chr09: 46712819-46721820 Glycine max
Glyma.09G244900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46712819-46714818 Glycine max
Glyma.09G244900 2.0kb downstream 2.0kb downstream 9002 true Chr09: 46714819-46723820 Glycine max
Glyma.09G244900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46721821-46723820 Glycine max
Glyma.09G244900 5.0kb upstream 5.0kb upstream 12002 true Chr09: 46709819-46721820 Glycine max
Glyma.09G244900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46709819-46714818 Glycine max
Glyma.09G244900 5.0kb downstream 5.0kb downstream 12002 true Chr09: 46714819-46726820 Glycine max
Glyma.09G244900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46721821-46726820 Glycine max
Glyma.09G244900 10.0kb upstream 10.0kb upstream 17002 true Chr09: 46704819-46721820 Glycine max
Glyma.09G244900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46704819-46714818 Glycine max
Glyma.09G244900 10.0kb downstream 10.0kb downstream 17002 true Chr09: 46714819-46731820 Glycine max
Glyma.09G244900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46721821-46731820 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307124 5265 Fabidae View MSA
124065016 5270 Rosid View MSA
123738710 5271 Pentapetalae View MSA
122788202 5272 Eudicot View MSA
122050140 5273 Angiosperm View MSA
121346522 5274 Embryophyte View MSA
123424720 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.43923 0.0 31.5601   Low
cufflinks 26.5085 0.0 109.327 High  
cufflinks 6.99719 0.0 34.9686   Low
cufflinks 27.0643 0.0 114.361 High  
cufflinks 23.705 0.0 97.0186 High  
cufflinks 24.6642 0.0 100.578 High  
cufflinks 14.21 0.0 61.1781    
cufflinks 26.591 0.0 112.323 High  
cufflinks 12.722 0.0 57.4136    
cufflinks 1.888       High
cufflinks 0.118       Low
cufflinks 0.599        
cufflinks 1.375        
cufflinks 1.565        
cufflinks 0.074       Low
cufflinks 1.028        
cufflinks 0.337        
cufflinks 1.336        
cufflinks 1.303        
cufflinks 0.965        
cufflinks 0.267        
cufflinks 0.985        
cufflinks 1.168        
cufflinks 0.093       Low
cufflinks 1.022        
cufflinks 0.294        

0 Strain