Gene : Glyma.09G245300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31307:SF3 - ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE PROTEIN Genomic Order:  2453
Name:  ? Glyma.09G245300 Secondary Identifier:  ? PAC:30486326
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G245300 0.5kb upstream 0.5kb upstream 3687 true Chr09: 46739854-46743540 Glycine max
Glyma.09G245300 0.5kb upstream 0.5kb upstream 500 false Chr09: 46739854-46740353 Glycine max
Glyma.09G245300 0.5kb downstream 0.5kb downstream 3687 true Chr09: 46740354-46744040 Glycine max
Glyma.09G245300 0.5kb downstream 0.5kb downstream 500 false Chr09: 46743541-46744040 Glycine max
Glyma.09G245300 1.0kb upstream 1.0kb upstream 4187 true Chr09: 46739354-46743540 Glycine max
Glyma.09G245300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46739354-46740353 Glycine max
Glyma.09G245300 1.0kb downstream 1.0kb downstream 4187 true Chr09: 46740354-46744540 Glycine max
Glyma.09G245300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46743541-46744540 Glycine max
Glyma.09G245300 2.0kb upstream 2.0kb upstream 5187 true Chr09: 46738354-46743540 Glycine max
Glyma.09G245300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46738354-46740353 Glycine max
Glyma.09G245300 2.0kb downstream 2.0kb downstream 5187 true Chr09: 46740354-46745540 Glycine max
Glyma.09G245300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46743541-46745540 Glycine max
Glyma.09G245300 5.0kb upstream 5.0kb upstream 8187 true Chr09: 46735354-46743540 Glycine max
Glyma.09G245300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46735354-46740353 Glycine max
Glyma.09G245300 5.0kb downstream 5.0kb downstream 8187 true Chr09: 46740354-46748540 Glycine max
Glyma.09G245300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46743541-46748540 Glycine max
Glyma.09G245300 10.0kb upstream 10.0kb upstream 13187 true Chr09: 46730354-46743540 Glycine max
Glyma.09G245300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46730354-46740353 Glycine max
Glyma.09G245300 10.0kb downstream 10.0kb downstream 13187 true Chr09: 46740354-46753540 Glycine max
Glyma.09G245300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46743541-46753540 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311907 5265 Fabidae View MSA
124069508 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.34658 0.0 22.7761    
cufflinks 9.4047 0.0 25.5341    
cufflinks 7.44429 0.0 20.6085    
cufflinks 9.53623 0.0 25.8398    
cufflinks 9.84662 0.0 26.563    
cufflinks 12.571 0.0 33.6623   High
cufflinks 7.98265 0.0 21.8179    
cufflinks 8.52566 0.0 23.2548    
cufflinks 6.26291 0.0 17.5185   Low
cufflinks 4.224        
cufflinks 4.722        
cufflinks 4.508        
cufflinks 3.113       Low
cufflinks 3.995        
cufflinks 2.955       Low
cufflinks 6.201        
cufflinks 2.715       Low
cufflinks 6.237        
cufflinks 5.55        
cufflinks 5.353        
cufflinks 5.95     High  
cufflinks 5.903        
cufflinks 5.57        
cufflinks 6.965     High High
cufflinks 5.183        
cufflinks 5.522        

0 Strain